Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC107626.1-201ENST00000471084 183 ntBASIC3.86□□□□□ -1.79
GRIN3BO60391 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.86□□□□□ -1.79
GRIN3BO60391 CYCSP23-201ENST00000519781 313 ntBASIC3.86□□□□□ -1.79
GRIN3BO60391 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.86□□□□□ -1.79
GRIN3BO60391 AL356575.1-201ENST00000603008 283 ntBASIC3.86□□□□□ -1.79
GRIN3BO60391 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.86□□□□□ -1.79
GRIN3BO60391 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.86□□□□□ -1.79
GRIN3BO60391 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.86□□□□□ -1.79
GRIN3BO60391 RNU6-198P-201ENST00000384258 104 ntBASIC3.85□□□□□ -1.79
GRIN3BO60391 RNU6-19P-201ENST00000384718 107 ntBASIC3.85□□□□□ -1.79
GRIN3BO60391 MIR196B-201ENST00000384852 84 ntBASIC3.85□□□□□ -1.79
GRIN3BO60391 AC019205.3-201ENST00000424573 156 ntBASIC3.85□□□□□ -1.79
GRIN3BO60391 AL357552.1-201ENST00000445254 415 ntBASIC3.85□□□□□ -1.79
GRIN3BO60391 AC007395.1-201ENST00000451333 677 ntBASIC3.85□□□□□ -1.79
GRIN3BO60391 AC117440.1-201ENST00000474107 571 ntBASIC3.85□□□□□ -1.79
GRIN3BO60391 AL049830.2-201ENST00000480072 201 ntBASIC3.85□□□□□ -1.79
GRIN3BO60391 SNORA40.9-201ENST00000515895 93 ntBASIC3.85□□□□□ -1.79
GRIN3BO60391 RNU6-479P-201ENST00000516348 105 ntBASIC3.85□□□□□ -1.79
GRIN3BO60391 RNA5SP24-201ENST00000516478 95 ntBASIC3.85□□□□□ -1.79
GRIN3BO60391 SNORA70.19-201ENST00000516717 90 ntBASIC3.85□□□□□ -1.79
GRIN3BO60391 RNU2-31P-201ENST00000516954 155 ntBASIC3.85□□□□□ -1.79
GRIN3BO60391 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.85□□□□□ -1.79
GRIN3BO60391 AC024405.2-202ENST00000532731 184 ntBASIC3.85□□□□□ -1.79
GRIN3BO60391 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.85□□□□□ -1.79
GRIN3BO60391 uc_338.1-201ENST00000612113 180 ntBASIC3.85□□□□□ -1.79
GRIN3BO60391 AC005520.5-201ENST00000613926 164 ntBASIC3.85□□□□□ -1.79
GRIN3BO60391 AC064859.1-201ENST00000624741 174 ntBASIC3.85□□□□□ -1.79
GRIN3BO60391 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
GRIN3BO60391 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
GRIN3BO60391 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
GRIN3BO60391 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
GRIN3BO60391 AL136164.4-201ENST00000625013 2135 ntBASIC3.85□□□□□ -1.79
GRIN3BO60391 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.84□□□□□ -1.79
GRIN3BO60391 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
GRIN3BO60391 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.84□□□□□ -1.79
GRIN3BO60391 RNU6-626P-201ENST00000363354 107 ntBASIC3.84□□□□□ -1.79
GRIN3BO60391 RNU6-873P-201ENST00000363833 107 ntBASIC3.84□□□□□ -1.79
GRIN3BO60391 Y_RNA.199-201ENST00000364014 102 ntBASIC3.84□□□□□ -1.79
GRIN3BO60391 SNORD20-201ENST00000384550 80 ntBASIC3.84□□□□□ -1.79
GRIN3BO60391 MIR184-201ENST00000384962 84 ntBASIC3.84□□□□□ -1.79
GRIN3BO60391 AC096649.2-201ENST00000416186 393 ntBASIC3.84□□□□□ -1.79
GRIN3BO60391 AL603825.1-201ENST00000438481 80 ntBASIC3.84□□□□□ -1.79
GRIN3BO60391 AL513328.1-201ENST00000446460 224 ntBASIC3.84□□□□□ -1.79
GRIN3BO60391 RPL23AP67-201ENST00000465341 474 ntBASIC3.84□□□□□ -1.79
GRIN3BO60391 AC090525.1-201ENST00000479116 478 ntBASIC3.84□□□□□ -1.79
GRIN3BO60391 SNORA31.16-201ENST00000516773 139 ntBASIC3.84□□□□□ -1.79
GRIN3BO60391 AP000867.2-201ENST00000532468 320 ntBASIC3.84□□□□□ -1.79
GRIN3BO60391 CYP4A27P-201ENST00000567218 190 ntBASIC3.84□□□□□ -1.79
GRIN3BO60391 AC037487.3-201ENST00000606668 112 ntBASIC3.84□□□□□ -1.79
GRIN3BO60391 AC010999.1-201ENST00000611856 324 ntBASIC3.84□□□□□ -1.79
GRIN3BO60391 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.84□□□□□ -1.79
GRIN3BO60391 AL109809.4-201ENST00000603520 2185 ntBASIC3.84□□□□□ -1.79
GRIN3BO60391 BX322639.1-202ENST00000423987 2213 ntBASIC3.84□□□□□ -1.79
GRIN3BO60391 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GRIN3BO60391 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.83□□□□□ -1.8
GRIN3BO60391 MIR22-201ENST00000362190 85 ntBASIC3.83□□□□□ -1.8
GRIN3BO60391 RNU1-70P-201ENST00000362618 164 ntBASIC3.83□□□□□ -1.8
GRIN3BO60391 Y_RNA.44-201ENST00000362676 108 ntBASIC3.83□□□□□ -1.8
GRIN3BO60391 U8.2-201ENST00000363156 134 ntBASIC3.83□□□□□ -1.8
GRIN3BO60391 RNU6-245P-201ENST00000384020 107 ntBASIC3.83□□□□□ -1.8
GRIN3BO60391 RNU6-20P-201ENST00000384106 107 ntBASIC3.83□□□□□ -1.8
GRIN3BO60391 RNU6-21P-201ENST00000384710 107 ntBASIC3.83□□□□□ -1.8
GRIN3BO60391 BMS1P22-201ENST00000414726 313 ntBASIC3.83□□□□□ -1.8
GRIN3BO60391 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.83□□□□□ -1.8
GRIN3BO60391 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.83□□□□□ -1.8
GRIN3BO60391 AL441985.1-201ENST00000457727 251 ntBASIC3.83□□□□□ -1.8
GRIN3BO60391 RNU7-110P-201ENST00000516891 62 ntBASIC3.83□□□□□ -1.8
GRIN3BO60391 AC233702.2-202ENST00000562547 291 ntBASIC3.83□□□□□ -1.8
GRIN3BO60391 AC105137.2-201ENST00000569073 466 ntBASIC3.83□□□□□ -1.8
GRIN3BO60391 SNORD98-201ENST00000636377 67 ntBASIC3.83□□□□□ -1.8
GRIN3BO60391 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
GRIN3BO60391 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.83□□□□□ -1.8
GRIN3BO60391 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GRIN3BO60391 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
GRIN3BO60391 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GRIN3BO60391 AC068647.1-201ENST00000489539 2265 ntBASIC3.82□□□□□ -1.8
GRIN3BO60391 RNU6-1010P-201ENST00000362757 107 ntBASIC3.82□□□□□ -1.8
GRIN3BO60391 RNU6-961P-201ENST00000363893 105 ntBASIC3.82□□□□□ -1.8
GRIN3BO60391 RNU4-56P-201ENST00000364700 142 ntBASIC3.82□□□□□ -1.8
GRIN3BO60391 Y_RNA.286-201ENST00000364813 102 ntBASIC3.82□□□□□ -1.8
GRIN3BO60391 RNU6-851P-201ENST00000384565 107 ntBASIC3.82□□□□□ -1.8
GRIN3BO60391 RNU6-959P-201ENST00000384671 107 ntBASIC3.82□□□□□ -1.8
GRIN3BO60391 Y_RNA.569-201ENST00000384749 103 ntBASIC3.82□□□□□ -1.8
GRIN3BO60391 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
GRIN3BO60391 EI24P2-201ENST00000397776 1076 ntBASIC3.82□□□□□ -1.8
GRIN3BO60391 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.82□□□□□ -1.8
GRIN3BO60391 Y_RNA.595-201ENST00000410403 105 ntBASIC3.82□□□□□ -1.8
GRIN3BO60391 RNU6-394P-201ENST00000410735 107 ntBASIC3.82□□□□□ -1.8
GRIN3BO60391 RNA5SP38-201ENST00000410750 119 ntBASIC3.82□□□□□ -1.8
GRIN3BO60391 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.82□□□□□ -1.8
GRIN3BO60391 snoU13.14-201ENST00000459372 104 ntBASIC3.82□□□□□ -1.8
GRIN3BO60391 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.82□□□□□ -1.8
GRIN3BO60391 AIG1P1-201ENST00000503376 148 ntBASIC3.82□□□□□ -1.8
GRIN3BO60391 AC074133.1-201ENST00000515696 183 ntBASIC3.82□□□□□ -1.8
GRIN3BO60391 MIR3144-201ENST00000579460 79 ntBASIC3.82□□□□□ -1.8
GRIN3BO60391 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.82□□□□□ -1.8
GRIN3BO60391 RPS15AP11-201ENST00000594193 385 ntBASIC3.82□□□□□ -1.8
GRIN3BO60391 AP001485.1-201ENST00000604799 199 ntBASIC3.82□□□□□ -1.8
GRIN3BO60391 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.82□□□□□ -1.8
GRIN3BO60391 AL365222.1-201ENST00000614661 98 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms