Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAF3IP2O43734 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAF3IP2O43734 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.54□□□□□ -2.16
TRAF3IP2O43734 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAF3IP2O43734 MIR3126-201ENST00000577443 74 ntBASIC1.54□□□□□ -2.16
TRAF3IP2O43734 AC024614.2-201ENST00000577584 372 ntBASIC1.54□□□□□ -2.16
TRAF3IP2O43734 MIR4287-201ENST00000579398 78 ntBASIC1.54□□□□□ -2.16
TRAF3IP2O43734 AC009994.1-201ENST00000606889 253 ntBASIC1.54□□□□□ -2.16
TRAF3IP2O43734 PCGEM1.1-201ENST00000613431 131 ntBASIC1.54□□□□□ -2.16
TRAF3IP2O43734 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.54□□□□□ -2.16
TRAF3IP2O43734 AC009248.2-201ENST00000619826 254 ntBASIC1.54□□□□□ -2.16
TRAF3IP2O43734 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TRAF3IP2O43734 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.54□□□□□ -2.16
TRAF3IP2O43734 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TRAF3IP2O43734 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRAF3IP2O43734 Y_RNA.123-201ENST00000363338 102 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 Y_RNA.301-201ENST00000364990 103 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 RNU6-234P-201ENST00000365229 104 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 RNU6-968P-201ENST00000384076 107 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 MIR521-1-201ENST00000384902 87 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 MIR517A-201ENST00000385001 87 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 RNA5SP213-201ENST00000391031 106 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
TRAF3IP2O43734 SRIP3-201ENST00000413200 219 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 AL139396.1-201ENST00000421137 167 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 EIF4EP2-201ENST00000422816 654 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.53□□□□□ -2.16
TRAF3IP2O43734 AL137159.1-201ENST00000452808 512 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 RPL31P58-201ENST00000469001 379 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 MTCO2P30-201ENST00000503662 364 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 AC021146.2-201ENST00000504736 556 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 AC018710.1-201ENST00000506509 158 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 AC046134.1-201ENST00000514454 666 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 SNORA4.4-201ENST00000515921 135 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 RNU4-49P-201ENST00000516080 140 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 RNU6-566P-201ENST00000516790 107 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 EIF4A1P12-201ENST00000551910 141 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.53□□□□□ -2.16
TRAF3IP2O43734 AC104581.2-201ENST00000572227 430 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 AP000654.2-201ENST00000605633 586 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 AC124303.1-201ENST00000605703 360 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 AC137590.2-201ENST00000619709 240 ntBASIC1.53□□□□□ -2.16
TRAF3IP2O43734 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TRAF3IP2O43734 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TRAF3IP2O43734 Y_RNA.166-201ENST00000363730 102 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 Y_RNA.279-201ENST00000364763 95 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 RNU6-596P-201ENST00000365395 98 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 SNORA32.2-201ENST00000384049 122 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 SNORA29-201ENST00000384183 140 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 SNORA36A-201ENST00000384221 132 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 MIR29C-201ENST00000385231 88 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 AL512604.1-201ENST00000404812 257 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 MTND3P8-201ENST00000412909 339 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 AL358453.1-201ENST00000422522 250 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 RBMX2P4-201ENST00000441256 376 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 AL353572.1-201ENST00000442490 417 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.52□□□□□ -2.17
TRAF3IP2O43734 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.52□□□□□ -2.17
TRAF3IP2O43734 AC079354.2-201ENST00000453523 154 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAF3IP2O43734 ACA59.1-201ENST00000515966 143 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 Y_RNA.676-201ENST00000516393 96 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 RNU6-1088P-201ENST00000516850 104 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 RNU6-250P-201ENST00000516958 103 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 AC233702.2-202ENST00000562547 291 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 MIR4255-201ENST00000579351 72 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 MIR4742-201ENST00000581069 85 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 POLR3GP2-201ENST00000588366 668 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 AC011712.1-201ENST00000588959 234 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 AC078899.2-201ENST00000595282 212 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 AC016727.1-205ENST00000605437 569 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 AC063943.3-201ENST00000615562 356 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.52□□□□□ -2.17
TRAF3IP2O43734 Y_RNA.140-201ENST00000363474 103 ntBASIC1.51□□□□□ -2.17
TRAF3IP2O43734 Y_RNA.151-201ENST00000363566 112 ntBASIC1.51□□□□□ -2.17
TRAF3IP2O43734 RNU6-593P-201ENST00000364716 112 ntBASIC1.51□□□□□ -2.17
TRAF3IP2O43734 RNU6-26P-201ENST00000383985 107 ntBASIC1.51□□□□□ -2.17
TRAF3IP2O43734 RNU6-790P-201ENST00000384479 105 ntBASIC1.51□□□□□ -2.17
TRAF3IP2O43734 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
TRAF3IP2O43734 RPS20P15-201ENST00000412792 311 ntBASIC1.51□□□□□ -2.17
TRAF3IP2O43734 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAF3IP2O43734 AC245102.2-201ENST00000448956 180 ntBASIC1.51□□□□□ -2.17
TRAF3IP2O43734 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.51□□□□□ -2.17
TRAF3IP2O43734 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAF3IP2O43734 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAF3IP2O43734 PRELID3BP1-201ENST00000457142 540 ntBASIC1.51□□□□□ -2.17
TRAF3IP2O43734 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAF3IP2O43734 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAF3IP2O43734 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAF3IP2O43734 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.51□□□□□ -2.17
TRAF3IP2O43734 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.51□□□□□ -2.17
TRAF3IP2O43734 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.51□□□□□ -2.17
TRAF3IP2O43734 MIR3683-201ENST00000580847 82 ntBASIC1.51□□□□□ -2.17
TRAF3IP2O43734 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAF3IP2O43734 MIR3976-201ENST00000606807 139 ntBASIC1.51□□□□□ -2.17
TRAF3IP2O43734 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.51□□□□□ -2.17
TRAF3IP2O43734 SCARNA4-201ENST00000629045 128 ntBASIC1.51□□□□□ -2.17
TRAF3IP2O43734 CASC19-280ENST00000642102 1351 ntBASIC1.5□□□□□ -2.17
TRAF3IP2O43734 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 156.5 ms