Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RPL21P104-201ENST00000464143 478 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 AC092185.1-201ENST00000491371 97 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.24□□□□□ -1.89
FOXN1O15353 SEPT14P8-201ENST00000508026 178 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 AC096725.1-201ENST00000514266 313 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 SNORD116-28-201ENST00000516123 91 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 SCARNA17.1-201ENST00000516211 143 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 SCARNA17.2-201ENST00000516334 143 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 RNA5SP468-201ENST00000516782 93 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 AC109479.2-201ENST00000517842 174 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.24□□□□□ -1.89
FOXN1O15353 AC090617.3-201ENST00000573670 475 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 AC060766.3-201ENST00000591442 263 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 Z83818.1-201ENST00000603584 150 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 AC004832.4-201ENST00000608952 331 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 SCARNA17.4-201ENST00000614296 143 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 AC097372.5-201ENST00000623665 376 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.24□□□□□ -1.89
FOXN1O15353 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.24□□□□□ -1.89
FOXN1O15353 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.24□□□□□ -1.89
FOXN1O15353 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
FOXN1O15353 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
FOXN1O15353 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
FOXN1O15353 DEFB108F-201ENST00000344638 222 ntBASIC3.23□□□□□ -1.89
FOXN1O15353 RNU6-222P-201ENST00000362438 107 ntBASIC3.23□□□□□ -1.89
FOXN1O15353 RNU4-90P-201ENST00000362773 141 ntBASIC3.23□□□□□ -1.89
FOXN1O15353 RNU6-740P-201ENST00000364734 105 ntBASIC3.23□□□□□ -1.89
FOXN1O15353 Y_RNA.286-201ENST00000364813 102 ntBASIC3.23□□□□□ -1.89
FOXN1O15353 RNU6-926P-201ENST00000384075 107 ntBASIC3.23□□□□□ -1.89
FOXN1O15353 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.23□□□□□ -1.89
FOXN1O15353 AL358453.1-201ENST00000422522 250 ntBASIC3.23□□□□□ -1.89
FOXN1O15353 RPS26P21-201ENST00000475397 348 ntBASIC3.23□□□□□ -1.89
FOXN1O15353 AC139453.3-201ENST00000493276 369 ntBASIC3.23□□□□□ -1.89
FOXN1O15353 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.23□□□□□ -1.89
FOXN1O15353 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.23□□□□□ -1.89
FOXN1O15353 RNU6-377P-201ENST00000515965 102 ntBASIC3.23□□□□□ -1.89
FOXN1O15353 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.23□□□□□ -1.89
FOXN1O15353 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.23□□□□□ -1.89
FOXN1O15353 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.23□□□□□ -1.89
FOXN1O15353 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.23□□□□□ -1.89
FOXN1O15353 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.22□□□□□ -1.89
FOXN1O15353 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
FOXN1O15353 RNU6-336P-201ENST00000364891 107 ntBASIC3.22□□□□□ -1.89
FOXN1O15353 Y_RNA.292-201ENST00000364904 97 ntBASIC3.22□□□□□ -1.89
FOXN1O15353 SNORA51.4-201ENST00000364993 124 ntBASIC3.22□□□□□ -1.89
FOXN1O15353 SNORD63-201ENST00000384262 68 ntBASIC3.22□□□□□ -1.89
FOXN1O15353 MIR613-201ENST00000385248 95 ntBASIC3.22□□□□□ -1.89
FOXN1O15353 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.22□□□□□ -1.89
FOXN1O15353 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.22□□□□□ -1.89
FOXN1O15353 HMGN2P16-201ENST00000456802 261 ntBASIC3.22□□□□□ -1.89
FOXN1O15353 RNA5SP76-201ENST00000516277 87 ntBASIC3.22□□□□□ -1.89
FOXN1O15353 MIR3921-201ENST00000577308 85 ntBASIC3.22□□□□□ -1.89
FOXN1O15353 AC010928.2-201ENST00000588017 287 ntBASIC3.22□□□□□ -1.89
FOXN1O15353 AL590240.4-201ENST00000616908 390 ntBASIC3.22□□□□□ -1.89
FOXN1O15353 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.22□□□□□ -1.89
FOXN1O15353 AC048347.1-201ENST00000624621 427 ntBASIC3.22□□□□□ -1.89
FOXN1O15353 AC108206.1-201ENST00000570186 4159 ntBASIC3.22□□□□□ -1.89
FOXN1O15353 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
FOXN1O15353 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
FOXN1O15353 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.22□□□□□ -1.89
FOXN1O15353 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
FOXN1O15353 AC002546.1-201ENST00000588041 2504 ntBASIC3.22□□□□□ -1.89
FOXN1O15353 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
FOXN1O15353 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
FOXN1O15353 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
FOXN1O15353 RNU6-1020P-201ENST00000363684 107 ntBASIC3.21□□□□□ -1.9
FOXN1O15353 RNU6-704P-201ENST00000364162 103 ntBASIC3.21□□□□□ -1.9
FOXN1O15353 RNY1P5-201ENST00000383890 115 ntBASIC3.21□□□□□ -1.9
FOXN1O15353 RNU6-166P-201ENST00000384371 107 ntBASIC3.21□□□□□ -1.9
FOXN1O15353 Y_RNA.504-201ENST00000384481 104 ntBASIC3.21□□□□□ -1.9
FOXN1O15353 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.21□□□□□ -1.9
FOXN1O15353 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.21□□□□□ -1.9
FOXN1O15353 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.21□□□□□ -1.9
FOXN1O15353 snoU13.30-201ENST00000458951 104 ntBASIC3.21□□□□□ -1.9
FOXN1O15353 snoU109.2-201ENST00000459316 135 ntBASIC3.21□□□□□ -1.9
FOXN1O15353 COX6CP14-201ENST00000469580 174 ntBASIC3.21□□□□□ -1.9
FOXN1O15353 MRPL42P6-201ENST00000486397 371 ntBASIC3.21□□□□□ -1.9
FOXN1O15353 RNU7-200P-201ENST00000516105 62 ntBASIC3.21□□□□□ -1.9
FOXN1O15353 MTND5P41-201ENST00000517498 206 ntBASIC3.21□□□□□ -1.9
FOXN1O15353 AP000867.2-201ENST00000532468 320 ntBASIC3.21□□□□□ -1.9
FOXN1O15353 AC072026.1-201ENST00000605023 201 ntBASIC3.21□□□□□ -1.9
FOXN1O15353 AC011921.3-201ENST00000605540 361 ntBASIC3.21□□□□□ -1.9
FOXN1O15353 AC090115.4-201ENST00000609970 188 ntBASIC3.21□□□□□ -1.9
FOXN1O15353 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
FOXN1O15353 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
FOXN1O15353 AC092593.1-201ENST00000515413 1815 ntBASIC3.21□□□□□ -1.9
FOXN1O15353 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
FOXN1O15353 Y_RNA.245-201ENST00000364493 95 ntBASIC3.2□□□□□ -1.9
FOXN1O15353 RNU6-804P-201ENST00000384286 107 ntBASIC3.2□□□□□ -1.9
FOXN1O15353 SNORA40C-201ENST00000391285 128 ntBASIC3.2□□□□□ -1.9
FOXN1O15353 RNU4-30P-201ENST00000410245 143 ntBASIC3.2□□□□□ -1.9
FOXN1O15353 Z85995.1-201ENST00000415547 335 ntBASIC3.2□□□□□ -1.9
FOXN1O15353 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.2□□□□□ -1.9
FOXN1O15353 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.2□□□□□ -1.9
FOXN1O15353 AC007560.1-201ENST00000426912 237 ntBASIC3.2□□□□□ -1.9
FOXN1O15353 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.2□□□□□ -1.9
FOXN1O15353 AC016700.2-201ENST00000446011 156 ntBASIC3.2□□□□□ -1.9
FOXN1O15353 AC091021.1-201ENST00000468051 388 ntBASIC3.2□□□□□ -1.9
FOXN1O15353 AC003982.1-202ENST00000469928 248 ntBASIC3.2□□□□□ -1.9
FOXN1O15353 Y_RNA.662-201ENST00000516028 97 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms