Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC090960.1-201ENST00000421072 306 ntBASIC1.11□□□□□ -2.23
LSM1O15116 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.11□□□□□ -2.23
LSM1O15116 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.11□□□□□ -2.23
LSM1O15116 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.11□□□□□ -2.23
LSM1O15116 RNU6-612P-201ENST00000516909 102 ntBASIC1.11□□□□□ -2.23
LSM1O15116 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.11□□□□□ -2.23
LSM1O15116 AC068790.2-201ENST00000602601 557 ntBASIC1.11□□□□□ -2.23
LSM1O15116 MZT1P2-201ENST00000604387 248 ntBASIC1.11□□□□□ -2.23
LSM1O15116 HULC.1-201ENST00000612720 240 ntBASIC1.11□□□□□ -2.23
LSM1O15116 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.11□□□□□ -2.23
LSM1O15116 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.11□□□□□ -2.23
LSM1O15116 AL390237.1-201ENST00000404226 1415 ntBASIC1.1□□□□□ -2.23
LSM1O15116 snoU2-30.2-201ENST00000362805 70 ntBASIC1.1□□□□□ -2.23
LSM1O15116 RNU6-227P-201ENST00000362865 103 ntBASIC1.1□□□□□ -2.23
LSM1O15116 RPL23AP36-201ENST00000413895 458 ntBASIC1.1□□□□□ -2.23
LSM1O15116 AC108667.1-201ENST00000428618 249 ntBASIC1.1□□□□□ -2.23
LSM1O15116 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.1□□□□□ -2.23
LSM1O15116 HMGN2P34-201ENST00000437647 269 ntBASIC1.1□□□□□ -2.23
LSM1O15116 AC073415.1-201ENST00000449240 153 ntBASIC1.1□□□□□ -2.23
LSM1O15116 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.1□□□□□ -2.23
LSM1O15116 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
LSM1O15116 SNORD116-28-201ENST00000516123 91 ntBASIC1.1□□□□□ -2.23
LSM1O15116 MTCO2P4-201ENST00000517968 247 ntBASIC1.1□□□□□ -2.23
LSM1O15116 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.1□□□□□ -2.23
LSM1O15116 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.1□□□□□ -2.23
LSM1O15116 AC026470.2-201ENST00000561492 181 ntBASIC1.1□□□□□ -2.23
LSM1O15116 AC103810.9-201ENST00000606688 112 ntBASIC1.1□□□□□ -2.23
LSM1O15116 AC104458.1-201ENST00000608243 463 ntBASIC1.1□□□□□ -2.23
LSM1O15116 AC109347.2-201ENST00000610220 349 ntBASIC1.1□□□□□ -2.23
LSM1O15116 TCL6_2.1-201ENST00000615162 119 ntBASIC1.1□□□□□ -2.23
LSM1O15116 AL603755.1-201ENST00000619504 163 ntBASIC1.1□□□□□ -2.23
LSM1O15116 AC139792.3-201ENST00000623525 224 ntBASIC1.1□□□□□ -2.23
LSM1O15116 MIR378A-201ENST00000362177 66 ntBASIC1.09□□□□□ -2.23
LSM1O15116 Y_RNA.201-201ENST00000364052 96 ntBASIC1.09□□□□□ -2.23
LSM1O15116 RNU6-1187P-201ENST00000364771 110 ntBASIC1.09□□□□□ -2.23
LSM1O15116 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.09□□□□□ -2.23
LSM1O15116 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.09□□□□□ -2.23
LSM1O15116 MTCYBP8-201ENST00000422855 651 ntBASIC1.09□□□□□ -2.23
LSM1O15116 SNX2P2-201ENST00000424553 323 ntBASIC1.09□□□□□ -2.23
LSM1O15116 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.09□□□□□ -2.23
LSM1O15116 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.09□□□□□ -2.23
LSM1O15116 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.09□□□□□ -2.23
LSM1O15116 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.09□□□□□ -2.23
LSM1O15116 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.09□□□□□ -2.23
LSM1O15116 ARL2BPP4-201ENST00000506854 471 ntBASIC1.09□□□□□ -2.23
LSM1O15116 SNORA14.1-201ENST00000516113 141 ntBASIC1.09□□□□□ -2.23
LSM1O15116 RNU6-948P-201ENST00000516374 107 ntBASIC1.09□□□□□ -2.23
LSM1O15116 RNU6-430P-201ENST00000517078 107 ntBASIC1.09□□□□□ -2.23
LSM1O15116 RNA5SP404-201ENST00000517118 132 ntBASIC1.09□□□□□ -2.23
LSM1O15116 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.09□□□□□ -2.23
LSM1O15116 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.09□□□□□ -2.23
LSM1O15116 MIR4709-201ENST00000577272 72 ntBASIC1.09□□□□□ -2.23
LSM1O15116 MIR3664-201ENST00000579074 99 ntBASIC1.09□□□□□ -2.23
LSM1O15116 MIR4753-201ENST00000585119 83 ntBASIC1.09□□□□□ -2.23
LSM1O15116 AP000942.3-201ENST00000603702 160 ntBASIC1.09□□□□□ -2.23
LSM1O15116 AC072046.2-201ENST00000618366 268 ntBASIC1.09□□□□□ -2.23
LSM1O15116 AL353770.2-201ENST00000620024 78 ntBASIC1.09□□□□□ -2.23
LSM1O15116 AL359697.1-201ENST00000624879 587 ntBASIC1.09□□□□□ -2.23
LSM1O15116 MIR515-2-201ENST00000384883 83 ntBASIC1.08□□□□□ -2.24
LSM1O15116 MIR515-1-201ENST00000384884 83 ntBASIC1.08□□□□□ -2.24
LSM1O15116 MIR513A1-201ENST00000385138 129 ntBASIC1.08□□□□□ -2.24
LSM1O15116 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
LSM1O15116 AP1B1P2-201ENST00000416196 106 ntBASIC1.08□□□□□ -2.24
LSM1O15116 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.08□□□□□ -2.24
LSM1O15116 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.08□□□□□ -2.24
LSM1O15116 AC004386.2-201ENST00000441858 148 ntBASIC1.08□□□□□ -2.24
LSM1O15116 AC009237.7-201ENST00000447357 229 ntBASIC1.08□□□□□ -2.24
LSM1O15116 AC016717.1-201ENST00000448918 286 ntBASIC1.08□□□□□ -2.24
LSM1O15116 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.08□□□□□ -2.24
LSM1O15116 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.08□□□□□ -2.24
LSM1O15116 RNU6-1037P-201ENST00000459571 107 ntBASIC1.08□□□□□ -2.24
LSM1O15116 AC007215.1-201ENST00000464893 276 ntBASIC1.08□□□□□ -2.24
LSM1O15116 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.08□□□□□ -2.24
LSM1O15116 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.08□□□□□ -2.24
LSM1O15116 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.08□□□□□ -2.24
LSM1O15116 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.08□□□□□ -2.24
LSM1O15116 AC027335.2-201ENST00000624030 375 ntBASIC1.08□□□□□ -2.24
LSM1O15116 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.08□□□□□ -2.24
LSM1O15116 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LSM1O15116 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.08□□□□□ -2.24
LSM1O15116 RNU6-1123P-201ENST00000362347 106 ntBASIC1.07□□□□□ -2.24
LSM1O15116 RNU1-124P-201ENST00000363861 145 ntBASIC1.07□□□□□ -2.24
LSM1O15116 Y_RNA.287-201ENST00000364853 94 ntBASIC1.07□□□□□ -2.24
LSM1O15116 RNU6-1286P-201ENST00000383871 107 ntBASIC1.07□□□□□ -2.24
LSM1O15116 SNORA67.2-201ENST00000384300 149 ntBASIC1.07□□□□□ -2.24
LSM1O15116 AL356776.1-201ENST00000406574 447 ntBASIC1.07□□□□□ -2.24
LSM1O15116 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.07□□□□□ -2.24
LSM1O15116 COX6CP10-201ENST00000416832 224 ntBASIC1.07□□□□□ -2.24
LSM1O15116 BTF3P4-201ENST00000418852 495 ntBASIC1.07□□□□□ -2.24
LSM1O15116 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.07□□□□□ -2.24
LSM1O15116 AL358934.1-201ENST00000432346 324 ntBASIC1.07□□□□□ -2.24
LSM1O15116 DYNLT3P2-201ENST00000442517 295 ntBASIC1.07□□□□□ -2.24
LSM1O15116 NFU1P2-201ENST00000448700 469 ntBASIC1.07□□□□□ -2.24
LSM1O15116 RPS27P1-201ENST00000450552 247 ntBASIC1.07□□□□□ -2.24
LSM1O15116 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.07□□□□□ -2.24
LSM1O15116 AC025465.4-201ENST00000513422 638 ntBASIC1.07□□□□□ -2.24
LSM1O15116 CENPUP1-201ENST00000526649 1202 ntBASIC1.07□□□□□ -2.24
LSM1O15116 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.07□□□□□ -2.24
LSM1O15116 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.07□□□□□ -2.24
LSM1O15116 TPRKBP2-201ENST00000565969 475 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms