Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.12□□□□□ -2.07
AP3D1O14617 HMGN2P38-201ENST00000423806 265 ntBASIC2.12□□□□□ -2.07
AP3D1O14617 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.12□□□□□ -2.07
AP3D1O14617 AL357134.1-201ENST00000445848 426 ntBASIC2.12□□□□□ -2.07
AP3D1O14617 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.12□□□□□ -2.07
AP3D1O14617 RPL30P10-201ENST00000488148 337 ntBASIC2.12□□□□□ -2.07
AP3D1O14617 AC090255.1-201ENST00000495779 349 ntBASIC2.12□□□□□ -2.07
AP3D1O14617 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.12□□□□□ -2.07
AP3D1O14617 RNU6-1198P-201ENST00000516904 67 ntBASIC2.12□□□□□ -2.07
AP3D1O14617 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.12□□□□□ -2.07
AP3D1O14617 AC005786.1-201ENST00000588553 154 ntBASIC2.12□□□□□ -2.07
AP3D1O14617 AC011494.1-201ENST00000596454 237 ntBASIC2.12□□□□□ -2.07
AP3D1O14617 AC018462.2-201ENST00000605375 395 ntBASIC2.12□□□□□ -2.07
AP3D1O14617 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.12□□□□□ -2.07
AP3D1O14617 CTSLP2-204ENST00000629029 392 ntBASIC2.12□□□□□ -2.07
AP3D1O14617 RNA5SP289-201ENST00000362332 137 ntBASIC2.11□□□□□ -2.07
AP3D1O14617 Y_RNA.132-201ENST00000363421 102 ntBASIC2.11□□□□□ -2.07
AP3D1O14617 Y_RNA.166-201ENST00000363730 102 ntBASIC2.11□□□□□ -2.07
AP3D1O14617 RNU6-595P-201ENST00000363944 107 ntBASIC2.11□□□□□ -2.07
AP3D1O14617 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
AP3D1O14617 RNU6-245P-201ENST00000384020 107 ntBASIC2.11□□□□□ -2.07
AP3D1O14617 RNU6-17P-201ENST00000384245 107 ntBASIC2.11□□□□□ -2.07
AP3D1O14617 Y_RNA.490-201ENST00000384413 102 ntBASIC2.11□□□□□ -2.07
AP3D1O14617 Y_RNA.510-201ENST00000384511 114 ntBASIC2.11□□□□□ -2.07
AP3D1O14617 RNU6-18P-201ENST00000384527 107 ntBASIC2.11□□□□□ -2.07
AP3D1O14617 MIR634-201ENST00000385208 97 ntBASIC2.11□□□□□ -2.07
AP3D1O14617 AC074085.1-201ENST00000413598 418 ntBASIC2.11□□□□□ -2.07
AP3D1O14617 AC244636.1-201ENST00000421152 228 ntBASIC2.11□□□□□ -2.07
AP3D1O14617 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
AP3D1O14617 RPS3AP52-201ENST00000435639 297 ntBASIC2.11□□□□□ -2.07
AP3D1O14617 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.11□□□□□ -2.07
AP3D1O14617 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.11□□□□□ -2.07
AP3D1O14617 AC026782.1-201ENST00000512952 449 ntBASIC2.11□□□□□ -2.07
AP3D1O14617 RNU6-58P-201ENST00000517143 103 ntBASIC2.11□□□□□ -2.07
AP3D1O14617 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.11□□□□□ -2.07
AP3D1O14617 AC027288.2-201ENST00000553028 243 ntBASIC2.11□□□□□ -2.07
AP3D1O14617 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.11□□□□□ -2.07
AP3D1O14617 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.11□□□□□ -2.07
AP3D1O14617 MIR6766-201ENST00000622641 72 ntBASIC2.11□□□□□ -2.07
AP3D1O14617 SCARNA15.3-201ENST00000626315 122 ntBASIC2.11□□□□□ -2.07
AP3D1O14617 SCARNA4.1-201ENST00000628597 123 ntBASIC2.11□□□□□ -2.07
AP3D1O14617 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.11□□□□□ -2.07
AP3D1O14617 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.11□□□□□ -2.07
AP3D1O14617 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
AP3D1O14617 RNU6-845P-201ENST00000362578 103 ntBASIC2.1□□□□□ -2.07
AP3D1O14617 RNA5SP212-201ENST00000391223 107 ntBASIC2.1□□□□□ -2.07
AP3D1O14617 RNA5SP338-201ENST00000410495 85 ntBASIC2.1□□□□□ -2.07
AP3D1O14617 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.1□□□□□ -2.07
AP3D1O14617 AC018634.1-201ENST00000437554 401 ntBASIC2.1□□□□□ -2.07
AP3D1O14617 RBMX2P4-201ENST00000441256 376 ntBASIC2.1□□□□□ -2.07
AP3D1O14617 AC107399.1-201ENST00000451226 265 ntBASIC2.1□□□□□ -2.07
AP3D1O14617 RN7SKP210-201ENST00000459176 261 ntBASIC2.1□□□□□ -2.07
AP3D1O14617 RPL31P58-201ENST00000469001 379 ntBASIC2.1□□□□□ -2.07
AP3D1O14617 AC104435.1-201ENST00000483483 166 ntBASIC2.1□□□□□ -2.07
AP3D1O14617 MRPS17P9-201ENST00000511924 393 ntBASIC2.1□□□□□ -2.07
AP3D1O14617 AC067942.3-201ENST00000512025 362 ntBASIC2.1□□□□□ -2.07
AP3D1O14617 RNU6-344P-201ENST00000516635 111 ntBASIC2.1□□□□□ -2.07
AP3D1O14617 RNU7-30P-201ENST00000516835 62 ntBASIC2.1□□□□□ -2.07
AP3D1O14617 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.1□□□□□ -2.07
AP3D1O14617 RRN3P3-201ENST00000549207 578 ntBASIC2.1□□□□□ -2.07
AP3D1O14617 MIR5007-201ENST00000583098 95 ntBASIC2.1□□□□□ -2.07
AP3D1O14617 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.1□□□□□ -2.07
AP3D1O14617 AL096840.1-201ENST00000603287 93 ntBASIC2.1□□□□□ -2.07
AP3D1O14617 AC005858.4-201ENST00000623191 700 ntBASIC2.1□□□□□ -2.07
AP3D1O14617 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
AP3D1O14617 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
AP3D1O14617 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.09□□□□□ -2.07
AP3D1O14617 Y_RNA.184-201ENST00000363884 108 ntBASIC2.09□□□□□ -2.07
AP3D1O14617 Y_RNA.319-201ENST00000365138 92 ntBASIC2.09□□□□□ -2.07
AP3D1O14617 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
AP3D1O14617 RNU6-876P-201ENST00000391295 104 ntBASIC2.09□□□□□ -2.07
AP3D1O14617 HMGN2P9-201ENST00000476875 229 ntBASIC2.09□□□□□ -2.07
AP3D1O14617 RNVU1-2-201ENST00000516326 135 ntBASIC2.09□□□□□ -2.07
AP3D1O14617 RNU2-34P-201ENST00000516534 121 ntBASIC2.09□□□□□ -2.07
AP3D1O14617 RNU6-856P-201ENST00000516959 98 ntBASIC2.09□□□□□ -2.07
AP3D1O14617 AL590705.4-201ENST00000532209 134 ntBASIC2.09□□□□□ -2.07
AP3D1O14617 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.09□□□□□ -2.07
AP3D1O14617 AP002770.2-201ENST00000543613 532 ntBASIC2.09□□□□□ -2.07
AP3D1O14617 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.09□□□□□ -2.07
AP3D1O14617 AC022254.1-201ENST00000567857 235 ntBASIC2.09□□□□□ -2.07
AP3D1O14617 AC104581.2-201ENST00000572227 430 ntBASIC2.09□□□□□ -2.07
AP3D1O14617 MIR4672-201ENST00000583126 81 ntBASIC2.09□□□□□ -2.07
AP3D1O14617 MIR4753-201ENST00000585119 83 ntBASIC2.09□□□□□ -2.07
AP3D1O14617 7SK.7-201ENST00000603504 247 ntBASIC2.09□□□□□ -2.07
AP3D1O14617 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
AP3D1O14617 CENPCP1-201ENST00000533085 2578 ntBASIC2.08□□□□□ -2.08
AP3D1O14617 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
AP3D1O14617 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.08□□□□□ -2.08
AP3D1O14617 RNU4-52P-201ENST00000384209 138 ntBASIC2.08□□□□□ -2.08
AP3D1O14617 SNORA67.2-201ENST00000384300 149 ntBASIC2.08□□□□□ -2.08
AP3D1O14617 MIR586-201ENST00000385035 97 ntBASIC2.08□□□□□ -2.08
AP3D1O14617 MIR676-201ENST00000390702 67 ntBASIC2.08□□□□□ -2.08
AP3D1O14617 AC009310.1-201ENST00000414414 451 ntBASIC2.08□□□□□ -2.08
AP3D1O14617 RPL21P111-201ENST00000418453 477 ntBASIC2.08□□□□□ -2.08
AP3D1O14617 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.08□□□□□ -2.08
AP3D1O14617 HMGB1P18-201ENST00000438801 619 ntBASIC2.08□□□□□ -2.08
AP3D1O14617 RPL23AP6-201ENST00000446637 472 ntBASIC2.08□□□□□ -2.08
AP3D1O14617 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.08□□□□□ -2.08
AP3D1O14617 RNU7-175P-201ENST00000515915 61 ntBASIC2.08□□□□□ -2.08
AP3D1O14617 RNA5SP281-201ENST00000516504 135 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms