Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC012676.2-201ENST00000619258 186 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 AC022418.1-201ENST00000624118 445 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 AC018630.2-201ENST00000534866 2403 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 RNU4-28P-201ENST00000364739 141 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 RNU6-1026P-201ENST00000384465 108 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 SNX2P2-201ENST00000424553 323 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.74□□□□□ -2.29
UBFD1O14562 RPL31P35-201ENST00000431058 377 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 MTCO3P29-201ENST00000432119 779 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 GPR143P-201ENST00000434155 205 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 USP9YP28-201ENST00000435142 589 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 AC009961.2-201ENST00000435771 251 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.74□□□□□ -2.29
UBFD1O14562 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 AC016717.1-201ENST00000448918 286 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 AC132479.1-201ENST00000449160 144 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 AC016632.1-201ENST00000503994 196 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
UBFD1O14562 RNU6-410P-201ENST00000517006 107 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.74□□□□□ -2.29
UBFD1O14562 MIR3664-201ENST00000579074 99 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 AC005730.3-201ENST00000583067 366 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 AC108706.1-201ENST00000611053 297 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 AC004223.4-201ENST00000612426 332 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.74□□□□□ -2.29
UBFD1O14562 AL603839.4-201ENST00000624658 1005 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 MIR338-201ENST00000636369 67 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 AC068647.2-201ENST00000637380 353 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.74□□□□□ -2.29
UBFD1O14562 AL391516.1-201ENST00000554380 2449 ntBASIC0.74□□□□□ -2.29
UBFD1O14562 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
UBFD1O14562 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
UBFD1O14562 Y_RNA.132-201ENST00000363421 102 ntBASIC0.73□□□□□ -2.29
UBFD1O14562 RNU6-1127P-201ENST00000384580 107 ntBASIC0.73□□□□□ -2.29
UBFD1O14562 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
UBFD1O14562 RNU6-584P-201ENST00000410350 95 ntBASIC0.73□□□□□ -2.29
UBFD1O14562 MTATP6P19-201ENST00000413797 659 ntBASIC0.73□□□□□ -2.29
UBFD1O14562 CST2P1-201ENST00000425770 87 ntBASIC0.73□□□□□ -2.29
UBFD1O14562 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.73□□□□□ -2.29
UBFD1O14562 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.73□□□□□ -2.29
UBFD1O14562 HSFY5P-201ENST00000453726 309 ntBASIC0.73□□□□□ -2.29
UBFD1O14562 snoU13.6-201ENST00000458785 104 ntBASIC0.73□□□□□ -2.29
UBFD1O14562 RNU7-182P-201ENST00000459009 62 ntBASIC0.73□□□□□ -2.29
UBFD1O14562 AC114982.1-201ENST00000469402 321 ntBASIC0.73□□□□□ -2.29
UBFD1O14562 MTND2P14-201ENST00000482139 351 ntBASIC0.73□□□□□ -2.29
UBFD1O14562 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.73□□□□□ -2.29
UBFD1O14562 AC079382.1-201ENST00000493346 557 ntBASIC0.73□□□□□ -2.29
UBFD1O14562 RNA5SP503-201ENST00000517047 117 ntBASIC0.73□□□□□ -2.29
UBFD1O14562 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.73□□□□□ -2.29
UBFD1O14562 AC133485.1-201ENST00000567176 124 ntBASIC0.73□□□□□ -2.29
UBFD1O14562 AC138907.6-201ENST00000568401 126 ntBASIC0.73□□□□□ -2.29
UBFD1O14562 AL356157.2-201ENST00000605122 111 ntBASIC0.73□□□□□ -2.29
UBFD1O14562 AC005520.5-201ENST00000613926 164 ntBASIC0.73□□□□□ -2.29
UBFD1O14562 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.73□□□□□ -2.29
UBFD1O14562 MIR8065-201ENST00000620577 100 ntBASIC0.73□□□□□ -2.29
UBFD1O14562 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.73□□□□□ -2.29
UBFD1O14562 MTND4P4-201ENST00000439033 1366 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 BX322639.1-202ENST00000423987 2213 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
UBFD1O14562 RNU6-266P-201ENST00000364225 107 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 RNU6-1065P-201ENST00000384513 106 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 MIR515-2-201ENST00000384883 83 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 MIR515-1-201ENST00000384884 83 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 MIR549A-201ENST00000385268 96 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 RNU6-1093P-201ENST00000391194 107 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 MTND3P17-201ENST00000416968 344 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 AC012306.1-201ENST00000423267 114 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 AC005534.2-201ENST00000431047 433 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.72□□□□□ -2.29
UBFD1O14562 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.72□□□□□ -2.29
UBFD1O14562 AC005178.1-201ENST00000508392 440 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 AC067942.3-201ENST00000512025 362 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 RPL39P5-202ENST00000512505 151 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 RN7SKP88-201ENST00000516847 250 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 RNU6-165P-201ENST00000517170 99 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.72□□□□□ -2.29
UBFD1O14562 TPRKBP2-201ENST00000565969 475 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.72□□□□□ -2.29
UBFD1O14562 TMF1P1-201ENST00000576058 373 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 MIR4703-201ENST00000577728 79 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 7SK.8-201ENST00000612110 250 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 7SK.11-201ENST00000615477 250 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 7SK.13-201ENST00000622040 250 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 SEPT14P19-203ENST00000633205 211 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 AC099654.5-201ENST00000636479 350 ntBASIC0.72□□□□□ -2.29
UBFD1O14562 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
UBFD1O14562 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
UBFD1O14562 RNU6-282P-201ENST00000365357 103 ntBASIC0.71□□□□□ -2.3
UBFD1O14562 RNA5SP259-201ENST00000365541 109 ntBASIC0.71□□□□□ -2.3
UBFD1O14562 Y_RNA.560-201ENST00000384689 102 ntBASIC0.71□□□□□ -2.3
UBFD1O14562 MIR193B-201ENST00000384907 83 ntBASIC0.71□□□□□ -2.3
UBFD1O14562 COX6CP10-201ENST00000416832 224 ntBASIC0.71□□□□□ -2.3
UBFD1O14562 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.71□□□□□ -2.3
UBFD1O14562 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.71□□□□□ -2.3
UBFD1O14562 AC079781.2-201ENST00000446424 169 ntBASIC0.71□□□□□ -2.3
UBFD1O14562 SCARNA18-201ENST00000459004 134 ntBASIC0.71□□□□□ -2.3
UBFD1O14562 AL163195.1-201ENST00000496941 348 ntBASIC0.71□□□□□ -2.3
UBFD1O14562 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.71□□□□□ -2.3
UBFD1O14562 RNU6-405P-201ENST00000516637 110 ntBASIC0.71□□□□□ -2.3
UBFD1O14562 SUMO2P16-201ENST00000519475 264 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 203.9 ms