Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.91□□□□□ -2.1
E2F3O00716 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.91□□□□□ -2.1
E2F3O00716 AC104564.1-201ENST00000493028 407 ntBASIC1.91□□□□□ -2.1
E2F3O00716 AC091874.1-201ENST00000511402 339 ntBASIC1.91□□□□□ -2.1
E2F3O00716 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.91□□□□□ -2.1
E2F3O00716 AC018630.3-201ENST00000542637 96 ntBASIC1.91□□□□□ -2.1
E2F3O00716 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.91□□□□□ -2.1
E2F3O00716 MIR3935-201ENST00000583472 104 ntBASIC1.91□□□□□ -2.1
E2F3O00716 POLR3GP2-201ENST00000588366 668 ntBASIC1.91□□□□□ -2.1
E2F3O00716 AC011494.1-201ENST00000596454 237 ntBASIC1.91□□□□□ -2.1
E2F3O00716 AP000942.3-201ENST00000603702 160 ntBASIC1.91□□□□□ -2.1
E2F3O00716 DUXAP9-208ENST00000622815 614 ntBASIC1.91□□□□□ -2.1
E2F3O00716 AL133216.2-202ENST00000634512 349 ntBASIC1.91□□□□□ -2.1
E2F3O00716 SNORD98-201ENST00000636377 67 ntBASIC1.91□□□□□ -2.1
E2F3O00716 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
E2F3O00716 Y_RNA.123-201ENST00000363338 102 ntBASIC1.9□□□□□ -2.11
E2F3O00716 Y_RNA.238-201ENST00000364441 102 ntBASIC1.9□□□□□ -2.11
E2F3O00716 Y_RNA.279-201ENST00000364763 95 ntBASIC1.9□□□□□ -2.11
E2F3O00716 RNU6-142P-201ENST00000384019 107 ntBASIC1.9□□□□□ -2.11
E2F3O00716 MIR517A-201ENST00000385001 87 ntBASIC1.9□□□□□ -2.11
E2F3O00716 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.9□□□□□ -2.11
E2F3O00716 CYCSP49-201ENST00000420810 319 ntBASIC1.9□□□□□ -2.11
E2F3O00716 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.9□□□□□ -2.11
E2F3O00716 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.9□□□□□ -2.11
E2F3O00716 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.9□□□□□ -2.11
E2F3O00716 AC098614.3-201ENST00000438957 440 ntBASIC1.9□□□□□ -2.11
E2F3O00716 AC092473.1-201ENST00000441098 221 ntBASIC1.9□□□□□ -2.11
E2F3O00716 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.9□□□□□ -2.11
E2F3O00716 AC022447.4-201ENST00000504053 364 ntBASIC1.9□□□□□ -2.11
E2F3O00716 RNU1-54P-201ENST00000517181 120 ntBASIC1.9□□□□□ -2.11
E2F3O00716 AP005660.1-201ENST00000522972 293 ntBASIC1.9□□□□□ -2.11
E2F3O00716 AP005639.2-201ENST00000527592 928 ntBASIC1.9□□□□□ -2.11
E2F3O00716 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.9□□□□□ -2.11
E2F3O00716 CPDP1-201ENST00000579660 283 ntBASIC1.9□□□□□ -2.11
E2F3O00716 SNRPGP19-201ENST00000603826 189 ntBASIC1.9□□□□□ -2.11
E2F3O00716 AC016727.1-205ENST00000605437 569 ntBASIC1.9□□□□□ -2.11
E2F3O00716 AC124303.1-201ENST00000605703 360 ntBASIC1.9□□□□□ -2.11
E2F3O00716 AL133215.3-201ENST00000609801 448 ntBASIC1.9□□□□□ -2.11
E2F3O00716 MIR8076-201ENST00000611401 83 ntBASIC1.9□□□□□ -2.11
E2F3O00716 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.9□□□□□ -2.11
E2F3O00716 MIR6128-201ENST00000615528 109 ntBASIC1.9□□□□□ -2.11
E2F3O00716 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
E2F3O00716 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
E2F3O00716 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
E2F3O00716 RNU6-306P-201ENST00000384617 107 ntBASIC1.89□□□□□ -2.11
E2F3O00716 RNU11-3P-201ENST00000391111 133 ntBASIC1.89□□□□□ -2.11
E2F3O00716 RN7SKP61-201ENST00000410642 295 ntBASIC1.89□□□□□ -2.11
E2F3O00716 BX510359.4-201ENST00000423750 193 ntBASIC1.89□□□□□ -2.11
E2F3O00716 AL133396.1-201ENST00000432048 687 ntBASIC1.89□□□□□ -2.11
E2F3O00716 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.89□□□□□ -2.11
E2F3O00716 RPS29P27-201ENST00000463711 170 ntBASIC1.89□□□□□ -2.11
E2F3O00716 PTP4A1P4-201ENST00000512479 322 ntBASIC1.89□□□□□ -2.11
E2F3O00716 ACA59.1-201ENST00000515966 143 ntBASIC1.89□□□□□ -2.11
E2F3O00716 Y_RNA.673-201ENST00000516306 88 ntBASIC1.89□□□□□ -2.11
E2F3O00716 SNORA20.3-201ENST00000516880 132 ntBASIC1.89□□□□□ -2.11
E2F3O00716 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.89□□□□□ -2.11
E2F3O00716 AC005730.3-201ENST00000583067 366 ntBASIC1.89□□□□□ -2.11
E2F3O00716 MIR3136-201ENST00000583498 78 ntBASIC1.89□□□□□ -2.11
E2F3O00716 AL034555.1-201ENST00000604816 211 ntBASIC1.89□□□□□ -2.11
E2F3O00716 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.89□□□□□ -2.11
E2F3O00716 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.89□□□□□ -2.11
E2F3O00716 AP000560.1-201ENST00000624150 1937 ntBASIC1.89□□□□□ -2.11
E2F3O00716 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
E2F3O00716 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
E2F3O00716 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
E2F3O00716 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
E2F3O00716 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
E2F3O00716 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
E2F3O00716 AC092268.1-201ENST00000342691 405 ntBASIC1.88□□□□□ -2.11
E2F3O00716 Y_RNA.338-201ENST00000365320 114 ntBASIC1.88□□□□□ -2.11
E2F3O00716 RNA5SP213-201ENST00000391031 106 ntBASIC1.88□□□□□ -2.11
E2F3O00716 AC019129.1-201ENST00000403786 261 ntBASIC1.88□□□□□ -2.11
E2F3O00716 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
E2F3O00716 Y_RNA.597-201ENST00000410463 100 ntBASIC1.88□□□□□ -2.11
E2F3O00716 RNA5SP489-201ENST00000410986 109 ntBASIC1.88□□□□□ -2.11
E2F3O00716 RNA5SP247-201ENST00000411181 105 ntBASIC1.88□□□□□ -2.11
E2F3O00716 SRIP3-201ENST00000413200 219 ntBASIC1.88□□□□□ -2.11
E2F3O00716 AC074085.1-201ENST00000413598 418 ntBASIC1.88□□□□□ -2.11
E2F3O00716 EIF1AXP1-201ENST00000419267 435 ntBASIC1.88□□□□□ -2.11
E2F3O00716 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.88□□□□□ -2.11
E2F3O00716 RPL23AP95-201ENST00000426806 265 ntBASIC1.88□□□□□ -2.11
E2F3O00716 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.88□□□□□ -2.11
E2F3O00716 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.88□□□□□ -2.11
E2F3O00716 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.88□□□□□ -2.11
E2F3O00716 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
E2F3O00716 SNORA31.16-201ENST00000516773 139 ntBASIC1.88□□□□□ -2.11
E2F3O00716 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.88□□□□□ -2.11
E2F3O00716 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.88□□□□□ -2.11
E2F3O00716 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
E2F3O00716 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
E2F3O00716 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
E2F3O00716 Y_RNA.4-201ENST00000362333 112 ntBASIC1.87□□□□□ -2.11
E2F3O00716 RNU1-17P-201ENST00000363022 152 ntBASIC1.87□□□□□ -2.11
E2F3O00716 Y_RNA.140-201ENST00000363474 103 ntBASIC1.87□□□□□ -2.11
E2F3O00716 SNORA72.1-201ENST00000363485 129 ntBASIC1.87□□□□□ -2.11
E2F3O00716 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
E2F3O00716 MIR548F5-201ENST00000408421 86 ntBASIC1.87□□□□□ -2.11
E2F3O00716 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.87□□□□□ -2.11
E2F3O00716 MTND1P17-201ENST00000448961 204 ntBASIC1.87□□□□□ -2.11
E2F3O00716 AC107399.1-201ENST00000451226 265 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms