Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SLC28A1O00337 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.69□□□□□ -2.14
SLC28A1O00337 AC004386.2-201ENST00000441858 148 ntBASIC1.69□□□□□ -2.14
SLC28A1O00337 MTCO1P44-201ENST00000441935 243 ntBASIC1.69□□□□□ -2.14
SLC28A1O00337 AL357134.1-201ENST00000445848 426 ntBASIC1.69□□□□□ -2.14
SLC28A1O00337 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.69□□□□□ -2.14
SLC28A1O00337 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.69□□□□□ -2.14
SLC28A1O00337 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.69□□□□□ -2.14
SLC28A1O00337 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.69□□□□□ -2.14
SLC28A1O00337 AC110588.1-201ENST00000559699 137 ntBASIC1.69□□□□□ -2.14
SLC28A1O00337 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.69□□□□□ -2.14
SLC28A1O00337 MIR5006-201ENST00000583027 110 ntBASIC1.69□□□□□ -2.14
SLC28A1O00337 MIR4753-201ENST00000585119 83 ntBASIC1.69□□□□□ -2.14
SLC28A1O00337 POLR3GP2-201ENST00000588366 668 ntBASIC1.69□□□□□ -2.14
SLC28A1O00337 AP000907.4-201ENST00000604143 237 ntBASIC1.69□□□□□ -2.14
SLC28A1O00337 AC010900.2-201ENST00000604508 210 ntBASIC1.69□□□□□ -2.14
SLC28A1O00337 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.69□□□□□ -2.14
SLC28A1O00337 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.69□□□□□ -2.14
SLC28A1O00337 MTND5P9-201ENST00000503854 1755 ntBASIC1.69□□□□□ -2.14
SLC28A1O00337 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SLC28A1O00337 Y_RNA.89-201ENST00000363031 102 ntBASIC1.68□□□□□ -2.14
SLC28A1O00337 Y_RNA.516-201ENST00000384541 124 ntBASIC1.68□□□□□ -2.14
SLC28A1O00337 AL079342.1-201ENST00000401460 267 ntBASIC1.68□□□□□ -2.14
SLC28A1O00337 MIR1283-1-201ENST00000408494 87 ntBASIC1.68□□□□□ -2.14
SLC28A1O00337 RPL31P63-201ENST00000422565 375 ntBASIC1.68□□□□□ -2.14
SLC28A1O00337 MTCO3P46-201ENST00000425787 232 ntBASIC1.68□□□□□ -2.14
SLC28A1O00337 Z82205.1-201ENST00000428456 297 ntBASIC1.68□□□□□ -2.14
SLC28A1O00337 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.68□□□□□ -2.14
SLC28A1O00337 AC003989.2-201ENST00000440224 169 ntBASIC1.68□□□□□ -2.14
SLC28A1O00337 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.68□□□□□ -2.14
SLC28A1O00337 DAP3P1-201ENST00000441522 278 ntBASIC1.68□□□□□ -2.14
SLC28A1O00337 ATP5J2P3-201ENST00000451550 258 ntBASIC1.68□□□□□ -2.14
SLC28A1O00337 MTND1P11-201ENST00000456661 876 ntBASIC1.68□□□□□ -2.14
SLC28A1O00337 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.68□□□□□ -2.14
SLC28A1O00337 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.68□□□□□ -2.14
SLC28A1O00337 AC091435.1-201ENST00000505442 584 ntBASIC1.68□□□□□ -2.14
SLC28A1O00337 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.68□□□□□ -2.14
SLC28A1O00337 SUB1P4-201ENST00000566062 339 ntBASIC1.68□□□□□ -2.14
SLC28A1O00337 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.68□□□□□ -2.14
SLC28A1O00337 MIR5094-201ENST00000578766 85 ntBASIC1.68□□□□□ -2.14
SLC28A1O00337 AC116312.1-201ENST00000606841 314 ntBASIC1.68□□□□□ -2.14
SLC28A1O00337 AC103810.8-201ENST00000607347 118 ntBASIC1.68□□□□□ -2.14
SLC28A1O00337 AC090617.10-201ENST00000624308 134 ntBASIC1.68□□□□□ -2.14
SLC28A1O00337 MIR517A-201ENST00000385001 87 ntBASIC1.67□□□□□ -2.14
SLC28A1O00337 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SLC28A1O00337 MIR320B2-201ENST00000408479 138 ntBASIC1.67□□□□□ -2.14
SLC28A1O00337 AC009161.1-201ENST00000417306 376 ntBASIC1.67□□□□□ -2.14
SLC28A1O00337 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.67□□□□□ -2.14
SLC28A1O00337 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.67□□□□□ -2.14
SLC28A1O00337 PPP1R2P5-201ENST00000457256 603 ntBASIC1.67□□□□□ -2.14
SLC28A1O00337 AC007215.1-201ENST00000464893 276 ntBASIC1.67□□□□□ -2.14
SLC28A1O00337 RPL23AP75-201ENST00000491601 451 ntBASIC1.67□□□□□ -2.14
SLC28A1O00337 RPS29P21-201ENST00000496272 170 ntBASIC1.67□□□□□ -2.14
SLC28A1O00337 RPS29P11-201ENST00000496507 171 ntBASIC1.67□□□□□ -2.14
SLC28A1O00337 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.67□□□□□ -2.14
SLC28A1O00337 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.67□□□□□ -2.14
SLC28A1O00337 AC104581.2-201ENST00000572227 430 ntBASIC1.67□□□□□ -2.14
SLC28A1O00337 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.67□□□□□ -2.14
SLC28A1O00337 MIR3672-201ENST00000584290 82 ntBASIC1.67□□□□□ -2.14
SLC28A1O00337 SNRPGP20-201ENST00000604477 205 ntBASIC1.67□□□□□ -2.14
SLC28A1O00337 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.67□□□□□ -2.14
SLC28A1O00337 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.67□□□□□ -2.14
SLC28A1O00337 AC009033.1-201ENST00000624279 431 ntBASIC1.67□□□□□ -2.14
SLC28A1O00337 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.67□□□□□ -2.14
SLC28A1O00337 MTND4P5-201ENST00000435821 1374 ntBASIC1.67□□□□□ -2.14
SLC28A1O00337 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SLC28A1O00337 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SLC28A1O00337 AL356292.1-201ENST00000283110 373 ntBASIC1.66□□□□□ -2.14
SLC28A1O00337 SNORD50.1-201ENST00000362987 71 ntBASIC1.66□□□□□ -2.14
SLC28A1O00337 Y_RNA.135-201ENST00000363439 95 ntBASIC1.66□□□□□ -2.14
SLC28A1O00337 Y_RNA.212-201ENST00000364177 102 ntBASIC1.66□□□□□ -2.14
SLC28A1O00337 MIR9-3-201ENST00000385084 90 ntBASIC1.66□□□□□ -2.14
SLC28A1O00337 MIR549A-201ENST00000385268 96 ntBASIC1.66□□□□□ -2.14
SLC28A1O00337 RNA5SP118-201ENST00000410385 109 ntBASIC1.66□□□□□ -2.14
SLC28A1O00337 C8orf59P1-201ENST00000429930 303 ntBASIC1.66□□□□□ -2.14
SLC28A1O00337 HMGB1P18-201ENST00000438801 619 ntBASIC1.66□□□□□ -2.14
SLC28A1O00337 AC009237.7-201ENST00000447357 229 ntBASIC1.66□□□□□ -2.14
SLC28A1O00337 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.66□□□□□ -2.14
SLC28A1O00337 MTCO3P8-201ENST00000453691 755 ntBASIC1.66□□□□□ -2.14
SLC28A1O00337 AC010409.1-201ENST00000487382 476 ntBASIC1.66□□□□□ -2.14
SLC28A1O00337 MTCYBP18-201ENST00000501056 747 ntBASIC1.66□□□□□ -2.14
SLC28A1O00337 MTCO2P30-201ENST00000503662 364 ntBASIC1.66□□□□□ -2.14
SLC28A1O00337 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SLC28A1O00337 ACA59.1-201ENST00000515966 143 ntBASIC1.66□□□□□ -2.14
SLC28A1O00337 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.66□□□□□ -2.14
SLC28A1O00337 SNORA31.17-201ENST00000516953 127 ntBASIC1.66□□□□□ -2.14
SLC28A1O00337 RNU6-856P-201ENST00000516959 98 ntBASIC1.66□□□□□ -2.14
SLC28A1O00337 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.66□□□□□ -2.14
SLC28A1O00337 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.66□□□□□ -2.14
SLC28A1O00337 SCARNA4-201ENST00000629045 128 ntBASIC1.66□□□□□ -2.14
SLC28A1O00337 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.66□□□□□ -2.14
SLC28A1O00337 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SLC28A1O00337 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SLC28A1O00337 RNU6-534P-201ENST00000364877 106 ntBASIC1.65□□□□□ -2.15
SLC28A1O00337 Y_RNA.295-201ENST00000364918 102 ntBASIC1.65□□□□□ -2.15
SLC28A1O00337 RNU6-418P-201ENST00000384035 107 ntBASIC1.65□□□□□ -2.15
SLC28A1O00337 RNU6-1215P-201ENST00000384441 102 ntBASIC1.65□□□□□ -2.15
SLC28A1O00337 RPL21P111-201ENST00000418453 477 ntBASIC1.65□□□□□ -2.15
SLC28A1O00337 AL358453.1-201ENST00000422522 250 ntBASIC1.65□□□□□ -2.15
SLC28A1O00337 AL513185.2-201ENST00000425543 193 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms