Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 MIR4709-201ENST00000577272 72 ntBASIC0.97□□□□□ -2.25
DFFAO00273 MIR4753-201ENST00000585119 83 ntBASIC0.97□□□□□ -2.25
DFFAO00273 MZT1P2-201ENST00000604387 248 ntBASIC0.97□□□□□ -2.25
DFFAO00273 U2.17-201ENST00000611454 95 ntBASIC0.97□□□□□ -2.25
DFFAO00273 MIR8065-201ENST00000620577 100 ntBASIC0.97□□□□□ -2.25
DFFAO00273 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.97□□□□□ -2.25
DFFAO00273 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.96□□□□□ -2.26
DFFAO00273 RNU5A-2P-201ENST00000384337 116 ntBASIC0.96□□□□□ -2.26
DFFAO00273 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
DFFAO00273 PIGFP2-201ENST00000421400 651 ntBASIC0.96□□□□□ -2.26
DFFAO00273 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.96□□□□□ -2.26
DFFAO00273 MTCO2P3-201ENST00000442543 421 ntBASIC0.96□□□□□ -2.26
DFFAO00273 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.96□□□□□ -2.26
DFFAO00273 AC132479.1-201ENST00000449160 144 ntBASIC0.96□□□□□ -2.26
DFFAO00273 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.96□□□□□ -2.26
DFFAO00273 SNRPFP3-201ENST00000457792 225 ntBASIC0.96□□□□□ -2.26
DFFAO00273 snoU13.6-201ENST00000458785 104 ntBASIC0.96□□□□□ -2.26
DFFAO00273 RPS26P45-201ENST00000471748 340 ntBASIC0.96□□□□□ -2.26
DFFAO00273 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.96□□□□□ -2.26
DFFAO00273 RNU7-40P-201ENST00000516397 64 ntBASIC0.96□□□□□ -2.26
DFFAO00273 AC016256.1-201ENST00000547971 354 ntBASIC0.96□□□□□ -2.26
DFFAO00273 AC024933.1-201ENST00000608472 348 ntBASIC0.96□□□□□ -2.26
DFFAO00273 AC040896.1-201ENST00000613819 479 ntBASIC0.96□□□□□ -2.26
DFFAO00273 AC005562.2-201ENST00000618264 111 ntBASIC0.96□□□□□ -2.26
DFFAO00273 AC009541.1-201ENST00000438279 2662 ntBASIC0.96□□□□□ -2.26
DFFAO00273 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
DFFAO00273 RNU6-1080P-201ENST00000383982 107 ntBASIC0.95□□□□□ -2.26
DFFAO00273 RNU6-1235P-201ENST00000384559 107 ntBASIC0.95□□□□□ -2.26
DFFAO00273 RNU6-903P-201ENST00000391270 109 ntBASIC0.95□□□□□ -2.26
DFFAO00273 RNU2-9P-201ENST00000410194 145 ntBASIC0.95□□□□□ -2.26
DFFAO00273 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.95□□□□□ -2.26
DFFAO00273 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.95□□□□□ -2.26
DFFAO00273 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.95□□□□□ -2.26
DFFAO00273 RPS27P1-201ENST00000450552 247 ntBASIC0.95□□□□□ -2.26
DFFAO00273 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.95□□□□□ -2.26
DFFAO00273 RNU6-498P-201ENST00000459468 107 ntBASIC0.95□□□□□ -2.26
DFFAO00273 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.95□□□□□ -2.26
DFFAO00273 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.95□□□□□ -2.26
DFFAO00273 RNA5SP102-201ENST00000516865 106 ntBASIC0.95□□□□□ -2.26
DFFAO00273 AL442163.3-201ENST00000554110 156 ntBASIC0.95□□□□□ -2.26
DFFAO00273 MIR3915-201ENST00000578518 97 ntBASIC0.95□□□□□ -2.26
DFFAO00273 MIR3908-201ENST00000579798 126 ntBASIC0.95□□□□□ -2.26
DFFAO00273 MIR5583-1-201ENST00000580941 59 ntBASIC0.95□□□□□ -2.26
DFFAO00273 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.95□□□□□ -2.26
DFFAO00273 AC103810.9-201ENST00000606688 112 ntBASIC0.95□□□□□ -2.26
DFFAO00273 AL360219.1-201ENST00000610230 366 ntBASIC0.95□□□□□ -2.26
DFFAO00273 AC007494.3-201ENST00000624660 743 ntBASIC0.95□□□□□ -2.26
DFFAO00273 AL359697.1-201ENST00000624879 587 ntBASIC0.95□□□□□ -2.26
DFFAO00273 AC099654.5-201ENST00000636479 350 ntBASIC0.95□□□□□ -2.26
DFFAO00273 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
DFFAO00273 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.95□□□□□ -2.26
DFFAO00273 snoU2-30.2-201ENST00000362805 70 ntBASIC0.94□□□□□ -2.26
DFFAO00273 SNORA33-201ENST00000363664 130 ntBASIC0.94□□□□□ -2.26
DFFAO00273 Y_RNA.164-201ENST00000363709 102 ntBASIC0.94□□□□□ -2.26
DFFAO00273 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
DFFAO00273 RNU6-1106P-201ENST00000390845 107 ntBASIC0.94□□□□□ -2.26
DFFAO00273 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.94□□□□□ -2.26
DFFAO00273 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.94□□□□□ -2.26
DFFAO00273 AC013410.2-201ENST00000422627 201 ntBASIC0.94□□□□□ -2.26
DFFAO00273 CETN4P-201ENST00000432407 469 ntBASIC0.94□□□□□ -2.26
DFFAO00273 AL356010.1-201ENST00000456364 102 ntBASIC0.94□□□□□ -2.26
DFFAO00273 RNU7-34P-201ENST00000459394 64 ntBASIC0.94□□□□□ -2.26
DFFAO00273 RPL39P5-202ENST00000512505 151 ntBASIC0.94□□□□□ -2.26
DFFAO00273 RN7SKP88-201ENST00000516847 250 ntBASIC0.94□□□□□ -2.26
DFFAO00273 RNA5SP404-201ENST00000517118 132 ntBASIC0.94□□□□□ -2.26
DFFAO00273 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.94□□□□□ -2.26
DFFAO00273 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.94□□□□□ -2.26
DFFAO00273 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.94□□□□□ -2.26
DFFAO00273 AC025449.1-201ENST00000603896 529 ntBASIC0.94□□□□□ -2.26
DFFAO00273 7SK.8-201ENST00000612110 250 ntBASIC0.94□□□□□ -2.26
DFFAO00273 7SK.11-201ENST00000615477 250 ntBASIC0.94□□□□□ -2.26
DFFAO00273 7SK.13-201ENST00000622040 250 ntBASIC0.94□□□□□ -2.26
DFFAO00273 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.94□□□□□ -2.26
DFFAO00273 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.94□□□□□ -2.26
DFFAO00273 SNORA72.3-201ENST00000365074 132 ntBASIC0.93□□□□□ -2.26
DFFAO00273 RNU6-975P-201ENST00000384296 105 ntBASIC0.93□□□□□ -2.26
DFFAO00273 RNY3P10-201ENST00000384764 102 ntBASIC0.93□□□□□ -2.26
DFFAO00273 MIR515-2-201ENST00000384883 83 ntBASIC0.93□□□□□ -2.26
DFFAO00273 MIR515-1-201ENST00000384884 83 ntBASIC0.93□□□□□ -2.26
DFFAO00273 SNORD73A-201ENST00000386062 65 ntBASIC0.93□□□□□ -2.26
DFFAO00273 MT-TH-201ENST00000387441 69 ntBASIC0.93□□□□□ -2.26
DFFAO00273 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.93□□□□□ -2.26
DFFAO00273 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.93□□□□□ -2.26
DFFAO00273 PGBD4P5-201ENST00000445958 426 ntBASIC0.93□□□□□ -2.26
DFFAO00273 AC016717.1-201ENST00000448918 286 ntBASIC0.93□□□□□ -2.26
DFFAO00273 SNRPGP9-201ENST00000456025 225 ntBASIC0.93□□□□□ -2.26
DFFAO00273 RNU7-138P-201ENST00000459479 64 ntBASIC0.93□□□□□ -2.26
DFFAO00273 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.93□□□□□ -2.26
DFFAO00273 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.93□□□□□ -2.26
DFFAO00273 RNU6-948P-201ENST00000516374 107 ntBASIC0.93□□□□□ -2.26
DFFAO00273 RNU6-612P-201ENST00000516909 102 ntBASIC0.93□□□□□ -2.26
DFFAO00273 AC060788.1-201ENST00000521318 469 ntBASIC0.93□□□□□ -2.26
DFFAO00273 CENPUP1-201ENST00000526649 1202 ntBASIC0.93□□□□□ -2.26
DFFAO00273 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.93□□□□□ -2.26
DFFAO00273 HIF1AP1-201ENST00000553642 175 ntBASIC0.93□□□□□ -2.26
DFFAO00273 SUB1P2-201ENST00000556401 297 ntBASIC0.93□□□□□ -2.26
DFFAO00273 AC026470.2-201ENST00000561492 181 ntBASIC0.93□□□□□ -2.26
DFFAO00273 MIR3664-201ENST00000579074 99 ntBASIC0.93□□□□□ -2.26
DFFAO00273 MIR4742-201ENST00000581069 85 ntBASIC0.93□□□□□ -2.26
DFFAO00273 AC016727.2-201ENST00000603988 621 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms