Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
H3BM21 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.16□□□□□ -1.74
H3BM21 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
H3BM21 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.74
H3BM21 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.15□□□□□ -1.74
H3BM21 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.15□□□□□ -1.75
H3BM21 MIR372-201ENST00000362225 67 ntBASIC4.15□□□□□ -1.75
H3BM21 U3.8-201ENST00000363675 217 ntBASIC4.15□□□□□ -1.75
H3BM21 RNA5SP283-201ENST00000365604 119 ntBASIC4.15□□□□□ -1.75
H3BM21 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.15□□□□□ -1.75
H3BM21 AL117342.1-201ENST00000404861 406 ntBASIC4.15□□□□□ -1.75
H3BM21 MIR1290-201ENST00000408735 78 ntBASIC4.15□□□□□ -1.75
H3BM21 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.15□□□□□ -1.75
H3BM21 RPL23AP82-202ENST00000427528 469 ntBASIC4.15□□□□□ -1.75
H3BM21 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.15□□□□□ -1.75
H3BM21 RPL23AP7-203ENST00000449021 469 ntBASIC4.15□□□□□ -1.75
H3BM21 CENPBD1P1-201ENST00000464061 469 ntBASIC4.15□□□□□ -1.75
H3BM21 RN7SL132P-201ENST00000478131 296 ntBASIC4.15□□□□□ -1.75
H3BM21 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.15□□□□□ -1.75
H3BM21 AP004371.1-201ENST00000525240 214 ntBASIC4.15□□□□□ -1.75
H3BM21 AC034105.4-201ENST00000568304 277 ntBASIC4.15□□□□□ -1.75
H3BM21 MIR3923-201ENST00000579521 83 ntBASIC4.15□□□□□ -1.75
H3BM21 AC005972.2-201ENST00000604690 348 ntBASIC4.15□□□□□ -1.75
H3BM21 MIR6867-201ENST00000610636 67 ntBASIC4.15□□□□□ -1.75
H3BM21 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.15□□□□□ -1.75
H3BM21 TCL6_2.1-201ENST00000615162 119 ntBASIC4.15□□□□□ -1.75
H3BM21 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.15□□□□□ -1.75
H3BM21 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
H3BM21 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
H3BM21 Z82217.1-201ENST00000625157 8149 ntBASIC4.14□□□□□ -1.75
H3BM21 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
H3BM21 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
H3BM21 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
H3BM21 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.14□□□□□ -1.75
H3BM21 RNU1-75P-201ENST00000347264 129 ntBASIC4.14□□□□□ -1.75
H3BM21 RNY3P2-201ENST00000362918 102 ntBASIC4.14□□□□□ -1.75
H3BM21 RN7SKP280-201ENST00000364196 304 ntBASIC4.14□□□□□ -1.75
H3BM21 RNU4-36P-201ENST00000364294 144 ntBASIC4.14□□□□□ -1.75
H3BM21 RNA5SP130-201ENST00000364431 114 ntBASIC4.14□□□□□ -1.75
H3BM21 RNU6-487P-201ENST00000365430 104 ntBASIC4.14□□□□□ -1.75
H3BM21 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
H3BM21 EI24P2-201ENST00000397776 1076 ntBASIC4.14□□□□□ -1.75
H3BM21 AC099548.1-201ENST00000421443 426 ntBASIC4.14□□□□□ -1.75
H3BM21 AC244098.2-201ENST00000422068 99 ntBASIC4.14□□□□□ -1.75
H3BM21 AL590383.1-201ENST00000428602 75 ntBASIC4.14□□□□□ -1.75
H3BM21 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.14□□□□□ -1.75
H3BM21 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.14□□□□□ -1.75
H3BM21 RNA5SP246-201ENST00000458909 119 ntBASIC4.14□□□□□ -1.75
H3BM21 SNORA84-201ENST00000459229 133 ntBASIC4.14□□□□□ -1.75
H3BM21 RNA5SP57-201ENST00000459463 123 ntBASIC4.14□□□□□ -1.75
H3BM21 DEFB131E-201ENST00000532329 154 ntBASIC4.14□□□□□ -1.75
H3BM21 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.14□□□□□ -1.75
H3BM21 MIR5006-201ENST00000583027 110 ntBASIC4.14□□□□□ -1.75
H3BM21 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
H3BM21 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.14□□□□□ -1.75
H3BM21 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
H3BM21 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
H3BM21 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
H3BM21 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.14□□□□□ -1.75
H3BM21 AC118273.1-201ENST00000525324 3006 ntBASIC4.13□□□□□ -1.75
H3BM21 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
H3BM21 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.13□□□□□ -1.75
H3BM21 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.13□□□□□ -1.75
H3BM21 SNORD114-7-201ENST00000362520 77 ntBASIC4.13□□□□□ -1.75
H3BM21 RNA5SP235-201ENST00000365411 114 ntBASIC4.13□□□□□ -1.75
H3BM21 MIR873-201ENST00000401120 77 ntBASIC4.13□□□□□ -1.75
H3BM21 RN7SKP177-201ENST00000410567 355 ntBASIC4.13□□□□□ -1.75
H3BM21 EIF4EP4-201ENST00000424916 578 ntBASIC4.13□□□□□ -1.75
H3BM21 AC012308.1-201ENST00000451232 178 ntBASIC4.13□□□□□ -1.75
H3BM21 SRIP1-201ENST00000489235 288 ntBASIC4.13□□□□□ -1.75
H3BM21 RPL36AP21-201ENST00000490372 323 ntBASIC4.13□□□□□ -1.75
H3BM21 RNU7-61P-201ENST00000515897 61 ntBASIC4.13□□□□□ -1.75
H3BM21 RN7SKP289-201ENST00000517244 295 ntBASIC4.13□□□□□ -1.75
H3BM21 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.13□□□□□ -1.75
H3BM21 AC009163.5-201ENST00000575421 637 ntBASIC4.13□□□□□ -1.75
H3BM21 AC090897.2-201ENST00000581715 130 ntBASIC4.13□□□□□ -1.75
H3BM21 MIR3136-201ENST00000583498 78 ntBASIC4.13□□□□□ -1.75
H3BM21 AC093732.2-201ENST00000607950 274 ntBASIC4.13□□□□□ -1.75
H3BM21 AC006133.1-201ENST00000617106 264 ntBASIC4.13□□□□□ -1.75
H3BM21 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
H3BM21 AC103988.1-201ENST00000566382 2177 ntBASIC4.13□□□□□ -1.75
H3BM21 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
H3BM21 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
H3BM21 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
H3BM21 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
H3BM21 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
H3BM21 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.12□□□□□ -1.75
H3BM21 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.12□□□□□ -1.75
H3BM21 Y_RNA.344-201ENST00000365381 112 ntBASIC4.12□□□□□ -1.75
H3BM21 RNU6-140P-201ENST00000384566 108 ntBASIC4.12□□□□□ -1.75
H3BM21 MIR554-201ENST00000384874 96 ntBASIC4.12□□□□□ -1.75
H3BM21 MIR513A2-201ENST00000385249 127 ntBASIC4.12□□□□□ -1.75
H3BM21 RN7SKP202-201ENST00000410439 330 ntBASIC4.12□□□□□ -1.75
H3BM21 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.12□□□□□ -1.75
H3BM21 AC083906.5-201ENST00000503722 328 ntBASIC4.12□□□□□ -1.75
H3BM21 MIR4429-201ENST00000580105 73 ntBASIC4.12□□□□□ -1.75
H3BM21 MIR3129-201ENST00000581095 76 ntBASIC4.12□□□□□ -1.75
H3BM21 AC107294.3-201ENST00000609211 526 ntBASIC4.12□□□□□ -1.75
H3BM21 MIR6875-201ENST00000617506 72 ntBASIC4.12□□□□□ -1.75
H3BM21 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms