Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.05□□□□□ -2.08
SHISA7A6NL88 Y_RNA.632-201ENST00000459189 102 ntBASIC2.05□□□□□ -2.08
SHISA7A6NL88 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.05□□□□□ -2.08
SHISA7A6NL88 PTP4A1P4-201ENST00000512479 322 ntBASIC2.05□□□□□ -2.08
SHISA7A6NL88 AC026782.1-201ENST00000512952 449 ntBASIC2.05□□□□□ -2.08
SHISA7A6NL88 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.05□□□□□ -2.08
SHISA7A6NL88 HSPE1P4-201ENST00000550617 308 ntBASIC2.05□□□□□ -2.08
SHISA7A6NL88 MIR5089-201ENST00000580047 84 ntBASIC2.05□□□□□ -2.08
SHISA7A6NL88 AC009229.3-201ENST00000608056 282 ntBASIC2.05□□□□□ -2.08
SHISA7A6NL88 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.05□□□□□ -2.08
SHISA7A6NL88 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.05□□□□□ -2.08
SHISA7A6NL88 AC012640.5-201ENST00000623897 319 ntBASIC2.05□□□□□ -2.08
SHISA7A6NL88 KPNA2P1-201ENST00000458289 1591 ntBASIC2.05□□□□□ -2.08
SHISA7A6NL88 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.05□□□□□ -2.08
SHISA7A6NL88 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.04□□□□□ -2.08
SHISA7A6NL88 AC092268.1-201ENST00000342691 405 ntBASIC2.04□□□□□ -2.08
SHISA7A6NL88 Y_RNA.123-201ENST00000363338 102 ntBASIC2.04□□□□□ -2.08
SHISA7A6NL88 U3.13-201ENST00000364804 214 ntBASIC2.04□□□□□ -2.08
SHISA7A6NL88 SNORD32A-201ENST00000364805 84 ntBASIC2.04□□□□□ -2.08
SHISA7A6NL88 RNU6-1032P-201ENST00000384100 107 ntBASIC2.04□□□□□ -2.08
SHISA7A6NL88 Y_RNA.460-201ENST00000384255 102 ntBASIC2.04□□□□□ -2.08
SHISA7A6NL88 RNU6-43P-201ENST00000384302 107 ntBASIC2.04□□□□□ -2.08
SHISA7A6NL88 MIR29B2-201ENST00000385055 81 ntBASIC2.04□□□□□ -2.08
SHISA7A6NL88 MIR561-201ENST00000385216 97 ntBASIC2.04□□□□□ -2.08
SHISA7A6NL88 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SHISA7A6NL88 RNA5SP270-201ENST00000411361 118 ntBASIC2.04□□□□□ -2.08
SHISA7A6NL88 EIF4EP2-201ENST00000422816 654 ntBASIC2.04□□□□□ -2.08
SHISA7A6NL88 USMG5P1-201ENST00000425964 177 ntBASIC2.04□□□□□ -2.08
SHISA7A6NL88 AC078809.1-201ENST00000427601 140 ntBASIC2.04□□□□□ -2.08
SHISA7A6NL88 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.04□□□□□ -2.08
SHISA7A6NL88 AC104564.1-201ENST00000493028 407 ntBASIC2.04□□□□□ -2.08
SHISA7A6NL88 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.04□□□□□ -2.08
SHISA7A6NL88 AC022447.4-201ENST00000504053 364 ntBASIC2.04□□□□□ -2.08
SHISA7A6NL88 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.04□□□□□ -2.08
SHISA7A6NL88 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.04□□□□□ -2.08
SHISA7A6NL88 RNU5F-2P-201ENST00000516066 82 ntBASIC2.04□□□□□ -2.08
SHISA7A6NL88 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.04□□□□□ -2.08
SHISA7A6NL88 AC093027.1-201ENST00000546698 429 ntBASIC2.04□□□□□ -2.08
SHISA7A6NL88 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.04□□□□□ -2.08
SHISA7A6NL88 AL669831.3-213ENST00000636676 183 ntBASIC2.04□□□□□ -2.08
SHISA7A6NL88 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
SHISA7A6NL88 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SHISA7A6NL88 RNU4-79P-201ENST00000362764 141 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 RNU6-1188P-201ENST00000363795 107 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 RNU6-457P-201ENST00000363999 107 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 Y_RNA.315-201ENST00000365117 102 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 Y_RNA.504-201ENST00000384481 104 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 RN7SKP61-201ENST00000410642 295 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 RPL23AP95-201ENST00000426806 265 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 AC027124.2-201ENST00000428249 105 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 AC244670.1-201ENST00000436879 112 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 AC003989.2-201ENST00000440224 169 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.03□□□□□ -2.08
SHISA7A6NL88 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.03□□□□□ -2.08
SHISA7A6NL88 GPM6BP3-201ENST00000442797 145 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 AL353752.1-201ENST00000454946 260 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 RPL30P15-201ENST00000457129 321 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 RPL36AP21-201ENST00000490372 323 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 RPL23AP63-201ENST00000498752 471 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.03□□□□□ -2.08
SHISA7A6NL88 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.03□□□□□ -2.08
SHISA7A6NL88 RNU7-193P-201ENST00000516723 65 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 RNU6-567P-201ENST00000516746 107 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.03□□□□□ -2.08
SHISA7A6NL88 AC016256.1-201ENST00000547971 354 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.03□□□□□ -2.08
SHISA7A6NL88 MIR5694-201ENST00000581190 76 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 AP000654.2-201ENST00000605633 586 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 AC084781.2-201ENST00000615568 161 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 AC090574.1-201ENST00000623186 233 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 AC090517.3-201ENST00000625170 141 ntBASIC2.03□□□□□ -2.08
SHISA7A6NL88 MTND5P9-201ENST00000503854 1755 ntBASIC2.03□□□□□ -2.09
SHISA7A6NL88 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
SHISA7A6NL88 AC073544.1-201ENST00000600110 1595 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SHISA7A6NL88 Y_RNA.58-201ENST00000362807 102 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 Y_RNA.154-201ENST00000363624 102 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 RNY3P1-201ENST00000365085 102 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 RNY3-201ENST00000365484 102 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 RNU6-968P-201ENST00000384076 107 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 RNU6-784P-201ENST00000384330 106 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 Y_RNA.490-201ENST00000384413 102 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 RNU1-148P-201ENST00000384472 162 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 RNU6-1274P-201ENST00000384557 107 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 RNY4P36-201ENST00000391116 96 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 RNU4-14P-201ENST00000410858 122 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 RNU6-321P-201ENST00000410912 106 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 RPS20P15-201ENST00000412792 311 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.02□□□□□ -2.09
SHISA7A6NL88 AL590556.1-201ENST00000423231 483 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.02□□□□□ -2.09
SHISA7A6NL88 AC009238.1-201ENST00000442165 424 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 AC009237.6-201ENST00000446969 424 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 AL031659.1-201ENST00000447075 539 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.02□□□□□ -2.09
SHISA7A6NL88 SNORD19B-201ENST00000459623 84 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 RPS29P27-201ENST00000463711 170 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 HMGB1P35-201ENST00000503360 598 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 AC093303.1-201ENST00000514549 295 ntBASIC2.02□□□□□ -2.09
SHISA7A6NL88 RNU6-1170P-201ENST00000515974 106 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms