Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 MTND4P5-201ENST00000435821 1374 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 RNU6-562P-201ENST00000362731 107 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 RNU6-142P-201ENST00000384019 107 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 SNORA29-201ENST00000384183 140 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 MIR487A-201ENST00000385009 80 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 MIR29B2-201ENST00000385055 81 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 SNORA67.5-201ENST00000391036 107 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 ZNF885P-201ENST00000420174 1098 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 AL590556.1-201ENST00000423231 483 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 AL353689.1-201ENST00000438895 199 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 PRELID3BP1-201ENST00000457142 540 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 U8.21-201ENST00000459536 136 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 AC132942.1-201ENST00000486753 483 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 MTCO1P29-201ENST00000496868 288 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 AC016632.1-201ENST00000503994 196 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 AC022447.4-201ENST00000504053 364 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 SUB1P3-201ENST00000564581 315 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 MIR4299-201ENST00000577899 72 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 CPDP1-201ENST00000579660 283 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 AC092794.1-201ENST00000612734 582 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 MIR8070-201ENST00000616510 88 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 AC006504.8-201ENST00000621046 635 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 AC009033.1-201ENST00000624279 431 ntBASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
NKX2-6A6NCS4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 SNORD32B-201ENST00000364460 84 ntBASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 Y_RNA.248-201ENST00000364501 109 ntBASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 SNORD116-11-201ENST00000383882 92 ntBASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 Y_RNA.473-201ENST00000384333 102 ntBASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 MIR208B-201ENST00000401172 77 ntBASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 AL356432.1-201ENST00000405809 419 ntBASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 RNU2-41P-201ENST00000410991 178 ntBASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 AC130509.1-201ENST00000464158 433 ntBASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 AC018710.1-201ENST00000506509 158 ntBASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 RNU6-864P-201ENST00000516256 108 ntBASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 RN7SKP256-201ENST00000517201 314 ntBASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 AF235103.2-201ENST00000525753 346 ntBASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 AC022616.8-201ENST00000533569 253 ntBASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 MIR3923-201ENST00000579521 83 ntBASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 MIR3136-201ENST00000583498 78 ntBASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 PCGEM1.1-201ENST00000613431 131 ntBASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 AC093913.1-201ENST00000614178 329 ntBASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 AC009248.2-201ENST00000619826 254 ntBASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
NKX2-6A6NCS4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 AC092268.1-201ENST00000342691 405 ntBASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 Y_RNA.135-201ENST00000363439 95 ntBASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 RNU6-1059P-201ENST00000363752 98 ntBASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 RNU4-42P-201ENST00000364738 142 ntBASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 SNORD48-201ENST00000364953 64 ntBASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 RNU6-128P-201ENST00000383976 107 ntBASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 RNU6-933P-201ENST00000384424 107 ntBASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 MIR517A-201ENST00000385001 87 ntBASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 SNORA26.3-201ENST00000391119 136 ntBASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 RNU6-1093P-201ENST00000391194 107 ntBASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 RNA5SP201-201ENST00000410316 124 ntBASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 AC012306.1-201ENST00000423267 114 ntBASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 PCMTD1P1-201ENST00000455560 355 ntBASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 RNU7-95P-201ENST00000459222 64 ntBASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 AC087441.2-201ENST00000529141 262 ntBASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 NDUFA5P6-201ENST00000542110 379 ntBASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 BX248123.2-201ENST00000606318 124 ntBASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 AL133215.3-201ENST00000609801 448 ntBASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.49□□□□□ -2.17
NKX2-6A6NCS4 AP000560.1-201ENST00000624150 1937 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 AC245060.5-201ENST00000610778 3293 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 AC006026.1-201ENST00000444025 1803 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 RNY1P10-201ENST00000363268 113 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 Y_RNA.157-201ENST00000363638 102 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 Y_RNA.269-201ENST00000364685 89 ntBASIC1.48□□□□□ -2.17
NKX2-6A6NCS4 RNU4-56P-201ENST00000364700 142 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms