Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC66A2RUB6 RNU6-496P-201ENST00000516145 99 ntBASIC3.32□□□□□ -1.88
CCDC66A2RUB6 RNU6-1338P-201ENST00000516328 91 ntBASIC3.32□□□□□ -1.88
CCDC66A2RUB6 CYCSP23-201ENST00000519781 313 ntBASIC3.32□□□□□ -1.88
CCDC66A2RUB6 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC66A2RUB6 DEFB108E-201ENST00000524692 240 ntBASIC3.32□□□□□ -1.88
CCDC66A2RUB6 AK6P2-201ENST00000549020 471 ntBASIC3.32□□□□□ -1.88
CCDC66A2RUB6 MIR3670-2-201ENST00000582974 65 ntBASIC3.32□□□□□ -1.88
CCDC66A2RUB6 MIR3670-1-201ENST00000584160 65 ntBASIC3.32□□□□□ -1.88
CCDC66A2RUB6 MIR3670-3-201ENST00000584855 65 ntBASIC3.32□□□□□ -1.88
CCDC66A2RUB6 MIR3670-4-201ENST00000612260 65 ntBASIC3.32□□□□□ -1.88
CCDC66A2RUB6 AC078938.1-201ENST00000620993 318 ntBASIC3.32□□□□□ -1.88
CCDC66A2RUB6 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
CCDC66A2RUB6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CCDC66A2RUB6 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC66A2RUB6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
CCDC66A2RUB6 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC66A2RUB6 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC66A2RUB6 AC026241.1-201ENST00000517873 2142 ntBASIC3.31□□□□□ -1.88
CCDC66A2RUB6 MTND5P35-201ENST00000557537 1720 ntBASIC3.31□□□□□ -1.88
CCDC66A2RUB6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC66A2RUB6 RNU6-793P-201ENST00000384233 104 ntBASIC3.31□□□□□ -1.88
CCDC66A2RUB6 Y_RNA.541-201ENST00000384640 113 ntBASIC3.31□□□□□ -1.88
CCDC66A2RUB6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC66A2RUB6 AL590004.2-201ENST00000404787 371 ntBASIC3.31□□□□□ -1.88
CCDC66A2RUB6 RNU5A-5P-201ENST00000411054 116 ntBASIC3.31□□□□□ -1.88
CCDC66A2RUB6 AC097463.2-201ENST00000421074 142 ntBASIC3.31□□□□□ -1.88
CCDC66A2RUB6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC66A2RUB6 Z98742.2-201ENST00000431564 187 ntBASIC3.31□□□□□ -1.88
CCDC66A2RUB6 AC073901.1-201ENST00000462471 408 ntBASIC3.31□□□□□ -1.88
CCDC66A2RUB6 RN7SL601P-201ENST00000471221 293 ntBASIC3.31□□□□□ -1.88
CCDC66A2RUB6 AC145146.1-201ENST00000496370 254 ntBASIC3.31□□□□□ -1.88
CCDC66A2RUB6 SNORA70.24-201ENST00000517233 118 ntBASIC3.31□□□□□ -1.88
CCDC66A2RUB6 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC66A2RUB6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC66A2RUB6 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC66A2RUB6 MIR4423-201ENST00000580922 80 ntBASIC3.31□□□□□ -1.88
CCDC66A2RUB6 AL357075.2-201ENST00000614906 189 ntBASIC3.31□□□□□ -1.88
CCDC66A2RUB6 UCA1.1-201ENST00000620952 75 ntBASIC3.31□□□□□ -1.88
CCDC66A2RUB6 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
CCDC66A2RUB6 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC66A2RUB6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC66A2RUB6 RNU4-90P-201ENST00000362773 141 ntBASIC3.3□□□□□ -1.88
CCDC66A2RUB6 RNU6-626P-201ENST00000363354 107 ntBASIC3.3□□□□□ -1.88
CCDC66A2RUB6 U3.9-201ENST00000363823 204 ntBASIC3.3□□□□□ -1.88
CCDC66A2RUB6 RNU6-961P-201ENST00000363893 105 ntBASIC3.3□□□□□ -1.88
CCDC66A2RUB6 RNU1-33P-201ENST00000364249 162 ntBASIC3.3□□□□□ -1.88
CCDC66A2RUB6 Y_RNA.416-201ENST00000384014 113 ntBASIC3.3□□□□□ -1.88
CCDC66A2RUB6 RNU6-1083P-201ENST00000384022 107 ntBASIC3.3□□□□□ -1.88
CCDC66A2RUB6 RNU6-102P-201ENST00000384485 104 ntBASIC3.3□□□□□ -1.88
CCDC66A2RUB6 HMGN2P35-201ENST00000412164 270 ntBASIC3.3□□□□□ -1.88
CCDC66A2RUB6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC66A2RUB6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC66A2RUB6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC66A2RUB6 AC117440.1-201ENST00000474107 571 ntBASIC3.3□□□□□ -1.88
CCDC66A2RUB6 AC107222.1-201ENST00000510899 637 ntBASIC3.3□□□□□ -1.88
CCDC66A2RUB6 MRPS36P2-201ENST00000512569 299 ntBASIC3.3□□□□□ -1.88
CCDC66A2RUB6 Y_RNA.673-201ENST00000516306 88 ntBASIC3.3□□□□□ -1.88
CCDC66A2RUB6 EIF4A1P12-201ENST00000551910 141 ntBASIC3.3□□□□□ -1.88
CCDC66A2RUB6 AC026470.2-201ENST00000561492 181 ntBASIC3.3□□□□□ -1.88
CCDC66A2RUB6 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC66A2RUB6 MIR4765-201ENST00000585007 77 ntBASIC3.3□□□□□ -1.88
CCDC66A2RUB6 MZT1P2-201ENST00000604387 248 ntBASIC3.3□□□□□ -1.88
CCDC66A2RUB6 SNORD113-5-201ENST00000607261 78 ntBASIC3.3□□□□□ -1.88
CCDC66A2RUB6 AP003122.5-201ENST00000527668 3766 ntBASIC3.3□□□□□ -1.88
CCDC66A2RUB6 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC66A2RUB6 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC66A2RUB6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CCDC66A2RUB6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC66A2RUB6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CCDC66A2RUB6 RNU1-62P-201ENST00000362599 164 ntBASIC3.29□□□□□ -1.88
CCDC66A2RUB6 RNU6-290P-201ENST00000365212 101 ntBASIC3.29□□□□□ -1.88
CCDC66A2RUB6 RNU6-20P-201ENST00000384106 107 ntBASIC3.29□□□□□ -1.88
CCDC66A2RUB6 MIR491-201ENST00000384877 84 ntBASIC3.29□□□□□ -1.88
CCDC66A2RUB6 MIR1289-1-201ENST00000408836 144 ntBASIC3.29□□□□□ -1.88
CCDC66A2RUB6 RNA5SP492-201ENST00000411330 114 ntBASIC3.29□□□□□ -1.88
CCDC66A2RUB6 RPL23AP58-201ENST00000440453 469 ntBASIC3.29□□□□□ -1.88
CCDC66A2RUB6 HSPE1P25-201ENST00000455484 251 ntBASIC3.29□□□□□ -1.88
CCDC66A2RUB6 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.29□□□□□ -1.88
CCDC66A2RUB6 AC008155.2-201ENST00000464337 397 ntBASIC3.29□□□□□ -1.88
CCDC66A2RUB6 AC091179.3-201ENST00000474761 144 ntBASIC3.29□□□□□ -1.88
CCDC66A2RUB6 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC66A2RUB6 SEPT14P8-201ENST00000508026 178 ntBASIC3.29□□□□□ -1.88
CCDC66A2RUB6 AC074133.1-201ENST00000515696 183 ntBASIC3.29□□□□□ -1.88
CCDC66A2RUB6 RNA5SP112-201ENST00000515937 99 ntBASIC3.29□□□□□ -1.88
CCDC66A2RUB6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC66A2RUB6 AC233702.2-202ENST00000562547 291 ntBASIC3.29□□□□□ -1.88
CCDC66A2RUB6 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC66A2RUB6 AC011373.1-201ENST00000607270 237 ntBASIC3.29□□□□□ -1.88
CCDC66A2RUB6 AC141273.2-201ENST00000618989 130 ntBASIC3.29□□□□□ -1.88
CCDC66A2RUB6 AC002064.3-201ENST00000623448 346 ntBASIC3.29□□□□□ -1.88
CCDC66A2RUB6 AC099654.7-201ENST00000635788 2127 ntBASIC3.29□□□□□ -1.88
CCDC66A2RUB6 AC069528.2-201ENST00000624849 1991 ntBASIC3.29□□□□□ -1.88
CCDC66A2RUB6 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC66A2RUB6 Y_RNA.16-201ENST00000362421 102 ntBASIC3.28□□□□□ -1.88
CCDC66A2RUB6 Y_RNA.20-201ENST00000362479 113 ntBASIC3.28□□□□□ -1.88
CCDC66A2RUB6 Y_RNA.230-201ENST00000364348 109 ntBASIC3.28□□□□□ -1.88
CCDC66A2RUB6 RNU1-109P-201ENST00000383960 147 ntBASIC3.28□□□□□ -1.88
CCDC66A2RUB6 SNORA18.3-201ENST00000384122 132 ntBASIC3.28□□□□□ -1.88
CCDC66A2RUB6 SNORA9-201ENST00000384215 133 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms