Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC092989.1-201ENST00000481235 277 ntBASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC098869.1-201ENST00000481627 292 ntBASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC117522.1-201ENST00000509821 380 ntBASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC087854.1-201ENST00000519706 414 ntBASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 GHRLOS.1-201ENST00000610995 70 ntBASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC005520.5-201ENST00000613926 164 ntBASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AP000484.1-201ENST00000620067 1252 ntBASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC106754.2-201ENST00000623006 233 ntBASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 Y_RNA.287-201ENST00000364853 94 ntBASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 Y_RNA.302-201ENST00000364997 102 ntBASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 Y_RNA.324-201ENST00000365165 102 ntBASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU6-1335P-201ENST00000365426 107 ntBASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU6-641P-201ENST00000384006 107 ntBASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 SNORA80D-201ENST00000384488 135 ntBASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 MIR1283-1-201ENST00000408494 87 ntBASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC016717.1-201ENST00000448918 286 ntBASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 GAPDHP17-201ENST00000449858 1001 ntBASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 MTCYBP1-201ENST00000454315 1119 ntBASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC104982.1-201ENST00000478775 574 ntBASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 HSPE1P23-201ENST00000509838 286 ntBASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC112206.4-201ENST00000515142 405 ntBASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AP003072.2-201ENST00000527756 676 ntBASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 APOOP3-201ENST00000536787 586 ntBASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC023050.3-201ENST00000541142 333 ntBASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 Z99289.3-201ENST00000605586 594 ntBASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC116165.2-201ENST00000616705 206 ntBASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AL603839.4-201ENST00000624658 1005 ntBASIC0.31□□□□□ -2.36
TCRBV4S1A1TA0A5B7 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNA5SP325-201ENST00000363756 130 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU6-1303P-201ENST00000364841 107 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU6-945P-201ENST00000383947 107 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU6-45P-201ENST00000384471 107 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 MIR208B-201ENST00000401172 77 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RPS29P13-201ENST00000402041 169 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC244023.1-201ENST00000426884 112 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC002486.1-201ENST00000435098 391 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 SRRM1P2-201ENST00000464531 1192 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 MTCO2P29-201ENST00000465212 189 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC016632.1-201ENST00000503994 196 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC010587.1-201ENST00000505809 469 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC105185.1-201ENST00000518705 535 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC091489.2-201ENST00000566263 604 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC242498.1-201ENST00000604134 111 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AL356157.2-201ENST00000605122 111 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC243994.1-201ENST00000618627 109 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC068787.1-201ENST00000623908 691 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 SNORA43.4-201ENST00000629559 138 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 MIR924-201ENST00000638017 53 ntBASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU5E-10P-201ENST00000363506 118 ntBASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU6-950P-201ENST00000384651 107 ntBASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU6-417P-201ENST00000384712 107 ntBASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 SNORD115.1-201ENST00000391109 76 ntBASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNA5SP467-201ENST00000391274 118 ntBASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 MIR300-201ENST00000401138 83 ntBASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNA5SP511-201ENST00000410487 115 ntBASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AL117339.3-201ENST00000418733 162 ntBASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC137499.1-201ENST00000427602 88 ntBASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AL162395.1-201ENST00000457882 422 ntBASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU7-21P-201ENST00000459430 62 ntBASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU6-1069P-201ENST00000516612 133 ntBASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC109479.2-201ENST00000517842 174 ntBASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC024995.1-201ENST00000523014 93 ntBASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AP003181.2-201ENST00000528941 181 ntBASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC022217.4-201ENST00000604389 163 ntBASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC104458.1-201ENST00000608243 463 ntBASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 U6.108-201ENST00000637764 58 ntBASIC0.29□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU6-562P-201ENST00000362731 107 ntBASIC0.28□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU6-931P-201ENST00000363850 107 ntBASIC0.28□□□□□ -2.36
TCRBV4S1A1TA0A5B7 Y_RNA.504-201ENST00000384481 104 ntBASIC0.28□□□□□ -2.36
TCRBV4S1A1TA0A5B7 Y_RNA.576-201ENST00000384781 102 ntBASIC0.28□□□□□ -2.36
TCRBV4S1A1TA0A5B7 SNORA75.2-201ENST00000391138 150 ntBASIC0.28□□□□□ -2.36
TCRBV4S1A1TA0A5B7 SNORA75.3-201ENST00000391231 150 ntBASIC0.28□□□□□ -2.36
TCRBV4S1A1TA0A5B7 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.28□□□□□ -2.36
TCRBV4S1A1TA0A5B7 MTND1P20-201ENST00000430341 950 ntBASIC0.28□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC119618.1-201ENST00000434191 222 ntBASIC0.28□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC016550.1-201ENST00000505348 785 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms