Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 MIR7153-201ENST00000637758 57 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 MIR622-201ENST00000638396 96 ntBASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC163A0A0D9SF12 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
CCDC163A0A0D9SF12 AL021368.2-201ENST00000606125 5352 ntBASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 LINC02555-201ENST00000563933 1951 ntBASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 AC017071.1-201ENST00000564407 2204 ntBASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 RNU1-62P-201ENST00000362599 164 ntBASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 MIR215-201ENST00000384858 110 ntBASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 AC007395.1-201ENST00000451333 677 ntBASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 RN7SKP83-201ENST00000516512 178 ntBASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 RPPH1-2P-201ENST00000516688 293 ntBASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 AL033523.1-201ENST00000605153 153 ntBASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 AL365361.1-201ENST00000566942 3481 ntBASIC3.27□□□□□ -1.89
CCDC163A0A0D9SF12 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 SNORD113-8-201ENST00000363497 74 ntBASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 SNORD87-201ENST00000364849 89 ntBASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 SNORA72.2-201ENST00000365028 127 ntBASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 Y_RNA.415-201ENST00000384012 112 ntBASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 Y_RNA.556-201ENST00000384677 113 ntBASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 RN7SKP284-201ENST00000411002 343 ntBASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 AC004866.1-201ENST00000411748 78 ntBASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 AC006539.3-201ENST00000454258 129 ntBASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 RNU7-110P-201ENST00000516891 62 ntBASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 AC018448.1-201ENST00000552843 316 ntBASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 MIR4300-201ENST00000581016 96 ntBASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 AL356280.1-201ENST00000603614 379 ntBASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 SNORD11B-201ENST00000607707 90 ntBASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 U6.104-201ENST00000637979 90 ntBASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC163A0A0D9SF12 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 RNU6-743P-201ENST00000364151 106 ntBASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 RNU6-301P-201ENST00000384277 107 ntBASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 Y_RNA.483-201ENST00000384380 101 ntBASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 MT-TW-201ENST00000387382 68 ntBASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 AL161788.1-201ENST00000441805 169 ntBASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 RNU7-14P-201ENST00000459331 62 ntBASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 AC083906.5-201ENST00000503722 328 ntBASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 RNU6-1098P-201ENST00000516772 96 ntBASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 CYCSP23-201ENST00000519781 313 ntBASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 MIR3162-201ENST00000581818 82 ntBASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 MIR3124-201ENST00000582636 67 ntBASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 AL137790.1-201ENST00000634283 177 ntBASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC163A0A0D9SF12 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 AC093010.3-201ENST00000570269 15214 ntBASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 SNORD32B-201ENST00000364460 84 ntBASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 Y_RNA.288-201ENST00000364854 92 ntBASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 RNU6-1026P-201ENST00000384465 108 ntBASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 SNORD115-46-201ENST00000390982 71 ntBASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 RNU4-30P-201ENST00000410245 143 ntBASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 RNA5SP475-201ENST00000410568 110 ntBASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 AC096920.1-201ENST00000423991 241 ntBASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 AC005002.2-201ENST00000438228 269 ntBASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 AC025750.2-201ENST00000442609 450 ntBASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 AC009237.7-201ENST00000447357 229 ntBASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 CYP2C59P-201ENST00000457790 269 ntBASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 TRBVB-201ENST00000477100 408 ntBASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 AC107222.1-201ENST00000510899 637 ntBASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 AC008885.1-201ENST00000514930 301 ntBASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC163A0A0D9SF12 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 553 ms