Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 RNU6-700P-201ENST00000391043 107 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 RPL21P1-201ENST00000399532 476 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 MTCYBP2-201ENST00000407745 171 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 MIR1252-201ENST00000408861 65 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 Z98742.3-201ENST00000418637 326 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 DPH3P2-201ENST00000422618 250 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 MTCO3P29-201ENST00000432119 779 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 AL731563.1-201ENST00000442202 214 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 RNA5SP112-201ENST00000515937 99 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 RNA5SP458-201ENST00000516188 119 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 RNU6-635P-201ENST00000516651 102 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 RNU7-4P-201ENST00000516961 62 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 Y_RNA.715-201ENST00000517082 110 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 MRPS36P4-201ENST00000534436 298 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 HSBP1P1-201ENST00000555205 166 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 MIR3136-201ENST00000583498 78 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 MIR4765-201ENST00000585007 77 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 RPL23AP78-201ENST00000599928 470 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 AC073410.2-201ENST00000603240 332 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 AC107871.2-201ENST00000612894 502 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 CTSLP2-204ENST00000629029 392 ntBASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NR2E3Q9Y5X4 AC092435.3-201ENST00000565538 3654 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 Y_RNA.380-201ENST00000365663 111 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 RNU1-57P-201ENST00000384491 166 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 SNORA46-201ENST00000384762 135 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 AC097463.2-201ENST00000421074 142 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 AL358453.1-201ENST00000422522 250 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 Z98742.2-201ENST00000431564 187 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 Z82188.1-201ENST00000436709 154 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 AL353705.4-201ENST00000449661 238 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 RNU7-169P-201ENST00000459456 61 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 AC132942.1-201ENST00000486753 483 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 AC093852.1-201ENST00000503587 266 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 MRPS35P2-201ENST00000508242 191 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 RNA5SP76-201ENST00000516277 87 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 AC040926.1-201ENST00000530195 238 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 AC004817.2-201ENST00000561794 651 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 AC006600.1-201ENST00000572529 153 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 VN1R91P-201ENST00000594377 169 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 AC016727.2-201ENST00000603988 621 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 AC124312.5-201ENST00000604451 268 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 RPL23AP88-201ENST00000605759 454 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 AL121655.1-201ENST00000605811 308 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 AL359198.2-201ENST00000611836 194 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 U4.1-201ENST00000620349 87 ntBASIC3.13□□□□□ -1.91
NR2E3Q9Y5X4 AC010329.5-201ENST00000623497 2174 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 RNU6-529P-201ENST00000363383 104 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 Y_RNA.176-201ENST00000363815 109 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 RNA5SP99-201ENST00000364020 114 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 SNORD14.1-201ENST00000365609 90 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 SNORA29-201ENST00000384183 140 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 RNU6-708P-201ENST00000384217 107 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 MIR186-201ENST00000384988 86 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 MIR625-201ENST00000385047 85 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 SNORA12.2-201ENST00000391040 156 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 Y_RNA.592-201ENST00000410274 109 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 RNA5SP21-201ENST00000410917 96 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 AC092423.1-201ENST00000430165 186 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 OR2AQ1P-201ENST00000451972 200 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 RPL30P1-201ENST00000488676 339 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 RPL23AP75-201ENST00000491601 451 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 AIG1P1-201ENST00000503376 148 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 AC131281.1-201ENST00000522984 164 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 AC104581.2-201ENST00000572227 430 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 AC010928.2-201ENST00000588017 287 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 AC006006.1-201ENST00000603082 144 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 AL450472.1-202ENST00000637286 180 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 Z75746.1-201ENST00000440243 2080 ntBASIC3.12□□□□□ -1.91
NR2E3Q9Y5X4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 Y_RNA.26-201ENST00000362539 101 ntBASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 RNU5B-2P-201ENST00000363036 113 ntBASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 RNU6-486P-201ENST00000363116 107 ntBASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 Y_RNA.210-201ENST00000364161 110 ntBASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 SNORA68.1-201ENST00000364537 132 ntBASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 U3.13-201ENST00000364804 214 ntBASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 AC007098.1-201ENST00000420122 367 ntBASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 RNU7-175P-201ENST00000515915 61 ntBASIC3.11□□□□□ -1.91
NR2E3Q9Y5X4 RNU6-567P-201ENST00000516746 107 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms