Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RNU6-1156P-201ENST00000410365 100 ntBASIC3.08□□□□□ -1.92
COL4A3BPQ9Y5P4 AC004386.2-201ENST00000441858 148 ntBASIC3.08□□□□□ -1.92
COL4A3BPQ9Y5P4 AC009237.7-201ENST00000447357 229 ntBASIC3.08□□□□□ -1.92
COL4A3BPQ9Y5P4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.08□□□□□ -1.92
COL4A3BPQ9Y5P4 MIR2053-201ENST00000459295 91 ntBASIC3.08□□□□□ -1.92
COL4A3BPQ9Y5P4 RNU7-14P-201ENST00000459331 62 ntBASIC3.08□□□□□ -1.92
COL4A3BPQ9Y5P4 RNU7-87P-201ENST00000459343 62 ntBASIC3.08□□□□□ -1.92
COL4A3BPQ9Y5P4 AP000870.1-201ENST00000472927 406 ntBASIC3.08□□□□□ -1.92
COL4A3BPQ9Y5P4 RNU6-976P-201ENST00000516086 111 ntBASIC3.08□□□□□ -1.92
COL4A3BPQ9Y5P4 RNU6-1098P-201ENST00000516772 96 ntBASIC3.08□□□□□ -1.92
COL4A3BPQ9Y5P4 RNA5SP490-201ENST00000517141 136 ntBASIC3.08□□□□□ -1.92
COL4A3BPQ9Y5P4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.08□□□□□ -1.92
COL4A3BPQ9Y5P4 AC007536.1-201ENST00000533382 349 ntBASIC3.08□□□□□ -1.92
COL4A3BPQ9Y5P4 ANP32BP3-201ENST00000559213 706 ntBASIC3.08□□□□□ -1.92
COL4A3BPQ9Y5P4 AC090617.3-201ENST00000573670 475 ntBASIC3.08□□□□□ -1.92
COL4A3BPQ9Y5P4 AL050343.2-201ENST00000607338 280 ntBASIC3.08□□□□□ -1.92
COL4A3BPQ9Y5P4 AL160413.1-201ENST00000622780 310 ntBASIC3.08□□□□□ -1.92
COL4A3BPQ9Y5P4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
COL4A3BPQ9Y5P4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL4A3BPQ9Y5P4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL4A3BPQ9Y5P4 MIR487A-201ENST00000385009 80 ntBASIC3.07□□□□□ -1.92
COL4A3BPQ9Y5P4 MIR559-201ENST00000385188 96 ntBASIC3.07□□□□□ -1.92
COL4A3BPQ9Y5P4 Y_RNA.579-201ENST00000390939 94 ntBASIC3.07□□□□□ -1.92
COL4A3BPQ9Y5P4 AL138827.1-201ENST00000402666 306 ntBASIC3.07□□□□□ -1.92
COL4A3BPQ9Y5P4 EDDM3CP-201ENST00000415977 425 ntBASIC3.07□□□□□ -1.92
COL4A3BPQ9Y5P4 SUMO1P4-201ENST00000429430 302 ntBASIC3.07□□□□□ -1.92
COL4A3BPQ9Y5P4 AL139109.1-201ENST00000455491 297 ntBASIC3.07□□□□□ -1.92
COL4A3BPQ9Y5P4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.07□□□□□ -1.92
COL4A3BPQ9Y5P4 AC144568.1-201ENST00000520139 137 ntBASIC3.07□□□□□ -1.92
COL4A3BPQ9Y5P4 AC006023.1-201ENST00000603944 259 ntBASIC3.07□□□□□ -1.92
COL4A3BPQ9Y5P4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
COL4A3BPQ9Y5P4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 AC062016.1-201ENST00000355719 319 ntBASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 RNU1-112P-201ENST00000364401 164 ntBASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 RNU6-438P-201ENST00000365561 103 ntBASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 Y_RNA.428-201ENST00000384078 102 ntBASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 RNU1-52P-201ENST00000384190 164 ntBASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 MIR300-201ENST00000401138 83 ntBASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 AC007064.1-201ENST00000412238 351 ntBASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 AL137159.1-201ENST00000452808 512 ntBASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 PRELID3BP1-201ENST00000457142 540 ntBASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 MTND5P16-201ENST00000460269 1703 ntBASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 UBE2DNL-203ENST00000474922 222 ntBASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 SNORA25.14-201ENST00000516481 132 ntBASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 MIR2355-201ENST00000517199 87 ntBASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 MIR1244-1-201ENST00000612829 85 ntBASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 AC243829.7-201ENST00000633081 225 ntBASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 MIR1244-3-201ENST00000635744 85 ntBASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 MIR1244-2-201ENST00000636449 85 ntBASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 MIR1244-4-202ENST00000636813 85 ntBASIC3.06□□□□□ -1.92
COL4A3BPQ9Y5P4 RNU1-62P-201ENST00000362599 164 ntBASIC3.05□□□□□ -1.92
COL4A3BPQ9Y5P4 RNU6-873P-201ENST00000363833 107 ntBASIC3.05□□□□□ -1.92
COL4A3BPQ9Y5P4 RNA5SP21-201ENST00000410917 96 ntBASIC3.05□□□□□ -1.92
COL4A3BPQ9Y5P4 RNA5SP184-201ENST00000411071 108 ntBASIC3.05□□□□□ -1.92
COL4A3BPQ9Y5P4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.05□□□□□ -1.92
COL4A3BPQ9Y5P4 MTCO3P8-201ENST00000453691 755 ntBASIC3.05□□□□□ -1.92
COL4A3BPQ9Y5P4 AC027575.1-201ENST00000481064 460 ntBASIC3.05□□□□□ -1.92
COL4A3BPQ9Y5P4 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.05□□□□□ -1.92
COL4A3BPQ9Y5P4 RNU6-120P-201ENST00000516077 103 ntBASIC3.05□□□□□ -1.92
COL4A3BPQ9Y5P4 RNA5SP137-201ENST00000516833 135 ntBASIC3.05□□□□□ -1.92
COL4A3BPQ9Y5P4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.05□□□□□ -1.92
COL4A3BPQ9Y5P4 DEFB131C-201ENST00000528817 165 ntBASIC3.05□□□□□ -1.92
COL4A3BPQ9Y5P4 MIR4672-201ENST00000583126 81 ntBASIC3.05□□□□□ -1.92
COL4A3BPQ9Y5P4 RPL12P50-201ENST00000603116 116 ntBASIC3.05□□□□□ -1.92
COL4A3BPQ9Y5P4 AC069234.5-201ENST00000611056 416 ntBASIC3.05□□□□□ -1.92
COL4A3BPQ9Y5P4 AC090971.5-201ENST00000621102 293 ntBASIC3.05□□□□□ -1.92
COL4A3BPQ9Y5P4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.05□□□□□ -1.92
COL4A3BPQ9Y5P4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
COL4A3BPQ9Y5P4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
COL4A3BPQ9Y5P4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
COL4A3BPQ9Y5P4 SNORD31B-201ENST00000364977 69 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 Y_RNA.463-201ENST00000384271 102 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 Y_RNA.500-201ENST00000384466 111 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 MIR9-1-201ENST00000385198 89 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 SNORA69.1-201ENST00000390904 137 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 RN7SKP123-201ENST00000410732 291 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 RNA5SP344-201ENST00000411081 104 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 AC063976.3-201ENST00000426849 329 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 HMGN2P18-201ENST00000450680 270 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 AC108938.1-201ENST00000451204 136 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 SNORD109B-201ENST00000458961 67 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 SNORD109A-201ENST00000459128 67 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 AC093259.1-201ENST00000509755 300 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 RNU6-991P-201ENST00000516168 107 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 RNA5SP76-201ENST00000516277 87 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 RNU6-344P-201ENST00000516635 111 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 RNU6-699P-201ENST00000517081 110 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 SNORD116.3-201ENST00000517176 78 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 RNU1-104P-201ENST00000517280 175 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 MIR5695-201ENST00000579717 85 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 AC005296.1-201ENST00000616145 209 ntBASIC3.04□□□□□ -1.92
COL4A3BPQ9Y5P4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms