Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 AL627390.1-201ENST00000396055 340 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 MIR1285-1-201ENST00000408593 84 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 RN7SKP142-201ENST00000411236 328 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 RNU2-64P-201ENST00000411315 191 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 AC060773.1-201ENST00000421698 310 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 AC104850.1-201ENST00000435940 476 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 AL031667.1-201ENST00000440222 725 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 RPS29P28-201ENST00000446439 141 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 MTCYBP1-201ENST00000454315 1119 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 SNORA31.4-201ENST00000516049 129 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 SNORA25.15-201ENST00000516487 89 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 Vault.3-201ENST00000516676 95 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 Y_RNA.695-201ENST00000516715 107 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 AP003072.2-201ENST00000527756 676 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 AC010620.1-201ENST00000601088 1102 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 AC087752.4-201ENST00000605911 462 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 AC103810.9-201ENST00000606688 112 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 AL133173.2-201ENST00000614270 90 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 AC005858.4-201ENST00000623191 700 ntBASIC0.92□□□□□ -2.26
CHTOPQ9Y3Y2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 BX322639.1-202ENST00000423987 2213 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 RNY4P34-201ENST00000364779 95 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 RNU1-36P-201ENST00000365130 165 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 SNORD116-9-201ENST00000384000 95 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 SNORD116-3-201ENST00000384287 95 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 SNORD116-1-201ENST00000384335 95 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 SNORD116-7-201ENST00000384404 95 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 SNORD116-5-201ENST00000384462 95 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 MIR764-201ENST00000390811 85 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 MTND3P17-201ENST00000416968 344 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 AL121890.1-201ENST00000435457 205 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 AC073614.1-201ENST00000438690 650 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 AC244505.5-201ENST00000443639 207 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 USP9YP29-201ENST00000445112 563 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 AC091435.1-201ENST00000505442 584 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 SCARNA24.1-201ENST00000516465 137 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 SNORA18.6-201ENST00000516792 115 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 RNU6-410P-201ENST00000517006 107 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 RNU6-1220P-201ENST00000517126 108 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 AC090572.1-201ENST00000519251 160 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 AC064872.1-201ENST00000604823 1072 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 AC211469.2-201ENST00000605461 205 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 AC109347.2-201ENST00000610220 349 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 AC005520.5-201ENST00000613926 164 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 MIR338-201ENST00000636369 67 ntBASIC0.91□□□□□ -2.26
CHTOPQ9Y3Y2 ZNF72P-201ENST00000425869 1908 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 RNU6-1097P-201ENST00000363586 107 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 SNORA75-201ENST00000384158 137 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 SNORD116-2-201ENST00000384274 95 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 RNU6-348P-201ENST00000384386 107 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 SNORD116-6-201ENST00000384711 96 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 AL356776.1-201ENST00000406574 447 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 RNU6-195P-201ENST00000411352 109 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 BX295541.1-201ENST00000417774 250 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 ISCA1P6-201ENST00000427740 390 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 Z83846.1-201ENST00000446798 265 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 MTND1P27-201ENST00000451117 902 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 RNU6-956P-201ENST00000458868 103 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 RPL39P38-201ENST00000467018 153 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 AC008628.2-201ENST00000502605 298 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 MTCO3P7-201ENST00000510008 774 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 AC090821.2-201ENST00000523552 176 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 AC015720.1-201ENST00000565251 277 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 MIR4528-201ENST00000577763 90 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 PIGPP4-201ENST00000584447 307 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 AC119751.7-201ENST00000600494 245 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 AC245014.2-201ENST00000603689 287 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 AC246785.4-201ENST00000605374 287 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.9□□□□□ -2.27
CHTOPQ9Y3Y2 AL390237.1-201ENST00000404226 1415 ntBASIC0.89□□□□□ -2.27
CHTOPQ9Y3Y2 RNU6-545P-201ENST00000362681 104 ntBASIC0.89□□□□□ -2.27
CHTOPQ9Y3Y2 RNU6-562P-201ENST00000362731 107 ntBASIC0.89□□□□□ -2.27
CHTOPQ9Y3Y2 Y_RNA.201-201ENST00000364052 96 ntBASIC0.89□□□□□ -2.27
CHTOPQ9Y3Y2 RNU6-108P-201ENST00000365558 107 ntBASIC0.89□□□□□ -2.27
CHTOPQ9Y3Y2 RNU6-74P-201ENST00000384235 107 ntBASIC0.89□□□□□ -2.27
CHTOPQ9Y3Y2 Y_RNA.553-201ENST00000384670 102 ntBASIC0.89□□□□□ -2.27
CHTOPQ9Y3Y2 RNA5SP213-201ENST00000391031 106 ntBASIC0.89□□□□□ -2.27
CHTOPQ9Y3Y2 RNA5SP323-201ENST00000391094 133 ntBASIC0.89□□□□□ -2.27
CHTOPQ9Y3Y2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms