Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 AC097520.1-201ENST00000624435 385 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 AC124864.2-201ENST00000624736 186 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 AL359697.1-201ENST00000624879 587 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 IGHVIII-44-202ENST00000636235 289 ntBASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KCNIP3Q9Y2W7 AC010615.1-201ENST00000594254 1764 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 Y_RNA.231-201ENST00000364358 102 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6-968P-201ENST00000384076 107 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6-360P-201ENST00000390944 104 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 MIR1267-201ENST00000408723 78 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 SNRPEP10-201ENST00000420249 274 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 HSPE1P9-201ENST00000440046 311 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 HSPE1P24-201ENST00000450782 238 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 AF186996.7-201ENST00000492781 209 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 AC091435.1-201ENST00000505442 584 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 HMGN1P13-201ENST00000505795 138 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 Y_RNA.693-201ENST00000516641 110 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 MRPS36P4-201ENST00000534436 298 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 AL512310.1-201ENST00000548639 172 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 AC008269.2-201ENST00000561915 1105 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 HMGB1P33-201ENST00000563485 527 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 SNORA59B-202ENST00000578183 701 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 MIR4422-201ENST00000581938 83 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 AC004492.1-201ENST00000607036 742 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 AC104458.1-201ENST00000608243 463 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 MIR8076-201ENST00000611401 83 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 OR5AK4P-201ENST00000635912 903 ntBASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
KCNIP3Q9Y2W7 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 AC245060.5-201ENST00000610778 3293 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 Y_RNA.51-201ENST00000362725 102 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 RNU1-96P-201ENST00000364163 162 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6-418P-201ENST00000384035 107 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6-784P-201ENST00000384330 106 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 CALM2P3-201ENST00000400429 449 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 EBAG9P1-201ENST00000418955 543 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 AC060773.1-201ENST00000421698 310 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 USP9YP14-201ENST00000430663 563 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 JTBP1-201ENST00000441314 247 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 AC004386.2-201ENST00000441858 148 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 AC009237.7-201ENST00000447357 229 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 OR2AQ1P-201ENST00000451972 200 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 snoU13.30-201ENST00000458951 104 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 AC007215.1-201ENST00000464893 276 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 HMGN2P9-201ENST00000476875 229 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 FO393415.2-201ENST00000480085 343 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 MTCO1P29-201ENST00000496868 288 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 AC011406.1-201ENST00000512440 370 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 MIR4753-201ENST00000585119 83 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6-89P-201ENST00000606519 100 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 RMST_3.1-201ENST00000611651 109 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 MIR7974-201ENST00000615835 79 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 AL590808.1-201ENST00000618696 141 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 AC084768.2-201ENST00000622736 221 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 AC064859.1-201ENST00000624741 174 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 AC068137.3-201ENST00000639191 341 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 BX322639.1-202ENST00000423987 2213 ntBASIC1.3□□□□□ -2.2
KCNIP3Q9Y2W7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 MIR302D-201ENST00000362275 68 ntBASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6-1235P-201ENST00000384559 107 ntBASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 MIR583-201ENST00000384846 75 ntBASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 SNORA40.18-201ENST00000391200 128 ntBASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 RNU1-78P-201ENST00000391248 165 ntBASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 MIR1304-201ENST00000408243 91 ntBASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 AC004866.1-201ENST00000411748 78 ntBASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 CST2P1-201ENST00000425770 87 ntBASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 FTH1P12-201ENST00000432137 551 ntBASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6-498P-201ENST00000459468 107 ntBASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 RPL36AP21-201ENST00000490372 323 ntBASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6-1041P-201ENST00000516254 102 ntBASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 MTND2P38-201ENST00000522536 667 ntBASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 AC084364.2-201ENST00000546924 395 ntBASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 MIR5006-201ENST00000583027 110 ntBASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 MIR3976-201ENST00000606807 139 ntBASIC1.29□□□□□ -2.2
KCNIP3Q9Y2W7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms