Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 RPS26P45-201ENST00000471748 340 ntBASIC0.65□□□□□ -2.31
HHLA3Q9XRX5 AC103851.1-201ENST00000506833 274 ntBASIC0.65□□□□□ -2.31
HHLA3Q9XRX5 RNU6-567P-201ENST00000516746 107 ntBASIC0.65□□□□□ -2.31
HHLA3Q9XRX5 AGGF1P4-201ENST00000568249 801 ntBASIC0.65□□□□□ -2.31
HHLA3Q9XRX5 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.65□□□□□ -2.31
HHLA3Q9XRX5 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.65□□□□□ -2.31
HHLA3Q9XRX5 AC064807.4-201ENST00000607201 407 ntBASIC0.65□□□□□ -2.31
HHLA3Q9XRX5 MIR6857-201ENST00000613267 93 ntBASIC0.65□□□□□ -2.31
HHLA3Q9XRX5 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.65□□□□□ -2.31
HHLA3Q9XRX5 AC009509.4-201ENST00000619202 509 ntBASIC0.65□□□□□ -2.31
HHLA3Q9XRX5 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.65□□□□□ -2.31
HHLA3Q9XRX5 SEPT14P19-203ENST00000633205 211 ntBASIC0.65□□□□□ -2.31
HHLA3Q9XRX5 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 RNU6-562P-201ENST00000362731 107 ntBASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 RNU6-266P-201ENST00000364225 107 ntBASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 RNU4-28P-201ENST00000364739 141 ntBASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 MIR1283-1-201ENST00000408494 87 ntBASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 MTND3P17-201ENST00000416968 344 ntBASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 MTCO2P34-201ENST00000421994 607 ntBASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 ISCA1P6-201ENST00000427740 390 ntBASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 Z73417.1-201ENST00000447373 778 ntBASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 AC016717.1-201ENST00000448918 286 ntBASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 CYCSP23-201ENST00000519781 313 ntBASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 MIR4703-201ENST00000577728 79 ntBASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 MIR4653-201ENST00000585107 83 ntBASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 AL020996.3-201ENST00000606617 222 ntBASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 AC004223.4-201ENST00000612426 332 ntBASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 MTND4P4-201ENST00000439033 1366 ntBASIC0.64□□□□□ -2.31
HHLA3Q9XRX5 HSBP1P2-201ENST00000299671 229 ntBASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 RNU6-108P-201ENST00000365558 107 ntBASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 MIR532-201ENST00000385025 91 ntBASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 RNU6-1093P-201ENST00000391194 107 ntBASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 AC013410.2-201ENST00000422627 201 ntBASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 RPL31P35-201ENST00000431058 377 ntBASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 HMGN2P34-201ENST00000437647 269 ntBASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 MTND2P39-201ENST00000457230 764 ntBASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 snoU13.6-201ENST00000458785 104 ntBASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 RNU7-34P-201ENST00000459394 64 ntBASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 AC010486.2-201ENST00000505572 483 ntBASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 RNU6-113P-201ENST00000516653 101 ntBASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 SUMO2P16-201ENST00000519475 264 ntBASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 MTCO3P23-201ENST00000561363 289 ntBASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 TPRKBP2-201ENST00000565969 475 ntBASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 RSL24D1P11-201ENST00000591045 491 ntBASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 AC005014.3-201ENST00000605985 190 ntBASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 AL136221.1-201ENST00000621449 509 ntBASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 AL603839.4-201ENST00000624658 1005 ntBASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 AL133216.2-202ENST00000634512 349 ntBASIC0.63□□□□□ -2.31
HHLA3Q9XRX5 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 RNU6-1123P-201ENST00000362347 106 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 snoU2-30.2-201ENST00000362805 70 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 RNU6-1097P-201ENST00000363586 107 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 RNU6-1080P-201ENST00000383982 107 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 MIR222-201ENST00000384992 110 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 MIR300-201ENST00000401138 83 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 POLR2J4-204ENST00000418424 324 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 AC090960.1-201ENST00000421072 306 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 AL606517.2-201ENST00000442855 241 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 SCARNA18-201ENST00000459004 134 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 Y_RNA.638-201ENST00000459374 113 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 HMGN1P12-201ENST00000499125 195 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 ARL2BPP4-201ENST00000506854 471 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 AC005178.1-201ENST00000508392 440 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 RNU6-351P-201ENST00000516097 100 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 RNU2-34P-201ENST00000516534 121 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 CBX3P8-201ENST00000532412 525 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 AC008088.1-201ENST00000580993 280 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 MIR4661-201ENST00000582720 75 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 Z84480.1-201ENST00000605131 311 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 AC104458.1-201ENST00000608243 463 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 AC021506.2-201ENST00000612354 169 ntBASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.62□□□□□ -2.31
HHLA3Q9XRX5 SNORD114-27-201ENST00000363766 70 ntBASIC0.61□□□□□ -2.31
HHLA3Q9XRX5 Y_RNA.287-201ENST00000364853 94 ntBASIC0.61□□□□□ -2.31
HHLA3Q9XRX5 MIR515-2-201ENST00000384883 83 ntBASIC0.61□□□□□ -2.31
HHLA3Q9XRX5 MIR515-1-201ENST00000384884 83 ntBASIC0.61□□□□□ -2.31
HHLA3Q9XRX5 RNA5SP109-201ENST00000391010 116 ntBASIC0.61□□□□□ -2.31
HHLA3Q9XRX5 RPL21P1-201ENST00000399532 476 ntBASIC0.61□□□□□ -2.31
HHLA3Q9XRX5 RNU6-584P-201ENST00000410350 95 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms