Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 Y_RNA.390-201ENST00000383932 102 ntBASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 RNU6-784P-201ENST00000384330 106 ntBASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 Y_RNA.473-201ENST00000384333 102 ntBASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 FGF7P8-201ENST00000402994 292 ntBASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 RPL37P10-201ENST00000412884 288 ntBASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 USP9YP30-201ENST00000430729 455 ntBASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 FTH1P25-201ENST00000447665 469 ntBASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 AL513124.1-201ENST00000450410 614 ntBASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 RN7SL274P-201ENST00000492268 272 ntBASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 AC116337.1-201ENST00000509680 687 ntBASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 RNU5F-4P-201ENST00000516581 114 ntBASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 AC016256.1-201ENST00000547971 354 ntBASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 EIF4A1P12-201ENST00000551910 141 ntBASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 MIR3162-201ENST00000581818 82 ntBASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 AC005730.3-201ENST00000583067 366 ntBASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 MIR4672-201ENST00000583126 81 ntBASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 DUXAP9-208ENST00000622815 614 ntBASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
UBQLN2Q9UHD9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 MIR449A-201ENST00000362113 91 ntBASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 SNORD50.1-201ENST00000362987 71 ntBASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 RNU6-601P-201ENST00000384540 107 ntBASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 SNORA8-201ENST00000384574 139 ntBASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 RNU6-160P-201ENST00000384591 107 ntBASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 AC244636.1-201ENST00000421152 228 ntBASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 HMGN2P19-201ENST00000425149 265 ntBASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 MTND4P17-201ENST00000470444 350 ntBASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 RPL23AP42-201ENST00000471152 471 ntBASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 AF186996.7-201ENST00000492781 209 ntBASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 AC005741.1-201ENST00000511094 432 ntBASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 RNU6-1016P-201ENST00000516689 94 ntBASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 AP000889.1-201ENST00000530968 660 ntBASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 AL096840.1-201ENST00000603287 93 ntBASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 AC009318.2-201ENST00000610917 651 ntBASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 U1.36-201ENST00000620684 176 ntBASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 AC130454.1-201ENST00000622948 401 ntBASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 AC091932.3-201ENST00000624223 323 ntBASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.87□□□□□ -2.11
UBQLN2Q9UHD9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 RNU6-23P-201ENST00000363283 107 ntBASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 RNU6-1026P-201ENST00000384465 108 ntBASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 MIR27B-201ENST00000385129 97 ntBASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 MIR549A-201ENST00000385268 96 ntBASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 RNA5SP212-201ENST00000391223 107 ntBASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 AL356432.1-201ENST00000405809 419 ntBASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 MIR548K-201ENST00000408406 116 ntBASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 AC027124.2-201ENST00000428249 105 ntBASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 HMGB1P18-201ENST00000438801 619 ntBASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 HMGN2P18-201ENST00000450680 270 ntBASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 MTND3P10-201ENST00000450967 341 ntBASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 AC116353.2-201ENST00000505332 712 ntBASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 7SK.7-201ENST00000603504 247 ntBASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 AC005296.1-201ENST00000616145 209 ntBASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 TPTEP1-208ENST00000636884 213 ntBASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 AC245060.5-201ENST00000610778 3293 ntBASIC1.86□□□□□ -2.11
UBQLN2Q9UHD9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
UBQLN2Q9UHD9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
UBQLN2Q9UHD9 Y_RNA.2-201ENST00000362330 96 ntBASIC1.85□□□□□ -2.11
UBQLN2Q9UHD9 Y_RNA.48-201ENST00000362710 103 ntBASIC1.85□□□□□ -2.11
UBQLN2Q9UHD9 RNU5B-2P-201ENST00000363036 113 ntBASIC1.85□□□□□ -2.11
UBQLN2Q9UHD9 SNORA18.2-201ENST00000383865 132 ntBASIC1.85□□□□□ -2.11
UBQLN2Q9UHD9 Y_RNA.533-201ENST00000384596 114 ntBASIC1.85□□□□□ -2.11
UBQLN2Q9UHD9 MIR32-201ENST00000384965 70 ntBASIC1.85□□□□□ -2.11
UBQLN2Q9UHD9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
UBQLN2Q9UHD9 SUMO2P12-201ENST00000405924 140 ntBASIC1.85□□□□□ -2.11
UBQLN2Q9UHD9 RNU2-41P-201ENST00000410991 178 ntBASIC1.85□□□□□ -2.11
UBQLN2Q9UHD9 PDCL2P1-201ENST00000419302 352 ntBASIC1.85□□□□□ -2.11
UBQLN2Q9UHD9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.85□□□□□ -2.11
UBQLN2Q9UHD9 AL358453.1-201ENST00000422522 250 ntBASIC1.85□□□□□ -2.11
UBQLN2Q9UHD9 EIF4EP2-201ENST00000422816 654 ntBASIC1.85□□□□□ -2.11
UBQLN2Q9UHD9 AC079354.2-201ENST00000453523 154 ntBASIC1.85□□□□□ -2.11
UBQLN2Q9UHD9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.85□□□□□ -2.11
UBQLN2Q9UHD9 RNA5SP57-201ENST00000459463 123 ntBASIC1.85□□□□□ -2.11
UBQLN2Q9UHD9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.85□□□□□ -2.11
UBQLN2Q9UHD9 AL117351.2-201ENST00000513571 157 ntBASIC1.85□□□□□ -2.11
UBQLN2Q9UHD9 SNORA20.3-201ENST00000516880 132 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms