Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 RNA5SP511-201ENST00000410487 115 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 AC006366.1-201ENST00000422002 759 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 AC007283.2-201ENST00000424739 197 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 AL133396.1-201ENST00000432048 687 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 MTND4P15-201ENST00000437913 1033 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 AC105313.1-201ENST00000509121 353 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 AC016957.1-201ENST00000534895 309 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 AC090517.1-201ENST00000569307 266 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 MIR4431-201ENST00000579990 94 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 AC078795.3-201ENST00000602913 472 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 AC022217.4-201ENST00000604389 163 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 RNU6-6P-201ENST00000606623 107 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 AC073349.3-201ENST00000617616 186 ntBASIC0.05□□□□□ -2.4
COMMD3Q9UBI1 RNU6-545P-201ENST00000362681 104 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 Y_RNA.46-201ENST00000362695 102 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 RNU6-199P-201ENST00000362954 107 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 Y_RNA.287-201ENST00000364853 94 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 RNU6-692P-201ENST00000384496 107 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 RNU1-139P-201ENST00000391307 165 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 RNU2-3P-201ENST00000410144 191 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 RNA5SP222-201ENST00000411039 105 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 MRPS18CP6-201ENST00000423587 223 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 AL445305.1-201ENST00000432577 575 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 MTND1P12-201ENST00000455231 147 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 RNU6-123P-201ENST00000516163 102 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 RNU7-51P-201ENST00000516560 62 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 RNU6-567P-201ENST00000516746 107 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 MTND4LP26-201ENST00000518144 282 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 AC087894.1-201ENST00000538359 518 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 AP001542.1-201ENST00000591314 200 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 AC005776.1-201ENST00000603164 290 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 AL139286.2-201ENST00000606838 396 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 AC100812.1-201ENST00000607622 580 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 AC097065.2-201ENST00000608159 533 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 AC097478.2-201ENST00000610572 514 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 AL391903.3-201ENST00000612158 163 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 MIR8054-201ENST00000620877 86 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 AL450472.1-202ENST00000637286 180 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 MIR924-201ENST00000638017 53 ntBASIC0.04□□□□□ -2.4
COMMD3Q9UBI1 AC073343.1-201ENST00000328239 651 ntBASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 RNU6-562P-201ENST00000362731 107 ntBASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 RNA5SP323-201ENST00000391094 133 ntBASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 RNU6-607P-201ENST00000411283 108 ntBASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 AL353777.1-201ENST00000425552 326 ntBASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 TIMM9P3-201ENST00000428659 274 ntBASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 RPL23AP50-201ENST00000434149 455 ntBASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 RNU6-917P-201ENST00000516294 104 ntBASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 AC087854.1-201ENST00000519706 414 ntBASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 MIR5692A1-201ENST00000580523 69 ntBASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 AC004223.2-201ENST00000590309 544 ntBASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 AL158032.1-201ENST00000605401 106 ntBASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 AC004832.4-201ENST00000608952 331 ntBASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 7SK.10-201ENST00000621414 298 ntBASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 AL359697.1-201ENST00000624879 587 ntBASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 U6.108-201ENST00000637764 58 ntBASIC0.03□□□□□ -2.4
COMMD3Q9UBI1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 SNORA2.2-201ENST00000365473 135 ntBASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 AL355796.1-201ENST00000406706 323 ntBASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 RNU6-177P-201ENST00000411257 104 ntBASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 RNU6-293P-201ENST00000411259 106 ntBASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 MTCYBP10-201ENST00000424905 650 ntBASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 AC000111.3-201ENST00000433478 193 ntBASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 AL596276.1-201ENST00000434465 418 ntBASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 MTCO2P7-201ENST00000446518 666 ntBASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 RNU6-948P-201ENST00000516374 107 ntBASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 RNU6-201P-201ENST00000517100 61 ntBASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 AC027419.1-201ENST00000522976 328 ntBASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 AP002001.1-203ENST00000534002 267 ntBASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 AC016256.1-201ENST00000547971 354 ntBASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 AC011195.1-201ENST00000578177 177 ntBASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 MIR4753-201ENST00000585119 83 ntBASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 AC112191.3-201ENST00000604371 277 ntBASIC0.02□□□□□ -2.41
COMMD3Q9UBI1 AC064807.4-201ENST00000607201 407 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms