Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 RNU5F-4P-201ENST00000516581 114 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 RNU1-92P-201ENST00000517017 135 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 SNORA31.24-201ENST00000517232 57 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 AL359821.1-201ENST00000605519 182 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 AL354950.2-201ENST00000617939 290 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 MTND5P10-201ENST00000603719 1809 ntBASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KLHL28Q9NXS3 Y_RNA.1-201ENST00000352915 104 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 MIR337-201ENST00000362281 93 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 Y_RNA.51-201ENST00000362725 102 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 RNU1-76P-201ENST00000362903 159 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 Y_RNA.296-201ENST00000364930 108 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 RNU6-996P-201ENST00000365438 107 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 Y_RNA.409-201ENST00000383990 98 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 RNU5A-6P-201ENST00000384136 116 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 RNU6-517P-201ENST00000384362 110 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 MIR1323-201ENST00000408090 73 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 C8orf59P1-201ENST00000429930 303 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 USP9YP14-201ENST00000430663 563 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 AL606489.2-201ENST00000433886 234 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 AC009474.2-201ENST00000451383 136 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 RNU7-63P-201ENST00000459054 62 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 RNU7-180P-201ENST00000459240 63 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 RPL26P26-201ENST00000480251 434 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 TRMT112P2-201ENST00000512910 132 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 SNORD60.2-201ENST00000516883 86 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 AL137161.1-201ENST00000532231 390 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 AC009994.1-201ENST00000606889 253 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 SNORA43.4-201ENST00000629559 138 ntBASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
KLHL28Q9NXS3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 MIR520A-201ENST00000384862 85 ntBASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 RNU6-360P-201ENST00000390944 104 ntBASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 Y_RNA.582-201ENST00000391023 95 ntBASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 RNU6-174P-201ENST00000410406 106 ntBASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 AP000275.1-201ENST00000411943 390 ntBASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 AC099677.2-201ENST00000436385 175 ntBASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 SNRPGP13-201ENST00000442212 177 ntBASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 AC245517.4-201ENST00000448601 281 ntBASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 AC007395.1-201ENST00000451333 677 ntBASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 HMGB1P29-201ENST00000505659 499 ntBASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 AP005597.4-201ENST00000526762 229 ntBASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 AC069114.2-201ENST00000604699 304 ntBASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 AC083806.3-201ENST00000614016 455 ntBASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 AL136221.1-201ENST00000621449 509 ntBASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 AC005609.4-201ENST00000625071 447 ntBASIC1.35□□□□□ -2.19
KLHL28Q9NXS3 AL159152.1-201ENST00000635019 2587 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 SNORA36A-201ENST00000384221 132 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 RNU4-55P-201ENST00000410731 137 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 MTCO1P21-201ENST00000416634 589 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 AL354695.1-201ENST00000427935 228 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 HSPE1P9-201ENST00000440046 311 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 AC092473.1-201ENST00000441098 221 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 JTBP1-201ENST00000441314 247 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 ATP5J2P3-201ENST00000451550 258 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 AC010531.2-201ENST00000465012 153 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 RPL9P9-202ENST00000466501 579 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 AL163973.1-201ENST00000484753 577 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 AC099513.1-201ENST00000490423 301 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 AC010493.1-201ENST00000513479 292 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 RNA5SP445-201ENST00000515889 115 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 RNU6-902P-201ENST00000517212 91 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 HMGB1P33-201ENST00000563485 527 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 PIGPP4-201ENST00000584447 307 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 RNU6-85P-201ENST00000605989 107 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 AC064807.4-201ENST00000607201 407 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 Z99129.1-201ENST00000612510 255 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 HULC.1-201ENST00000612720 240 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 AC068792.1-201ENST00000621354 417 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 MIR8063-201ENST00000621930 81 ntBASIC1.34□□□□□ -2.19
KLHL28Q9NXS3 AL391987.6-201ENST00000305671 199 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 Y_RNA.255-201ENST00000364581 97 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 MIR208B-201ENST00000401172 77 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 RNU2-66P-201ENST00000410650 161 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 AC004965.1-201ENST00000413033 213 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 EBAG9P1-201ENST00000418955 543 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 AC012306.1-201ENST00000423267 114 ntBASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.33□□□□□ -2.2
KLHL28Q9NXS3 AC245047.4-201ENST00000433189 144 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms