Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 MIR1248-201ENST00000629190 106 ntBASIC2.47□□□□□ -2.01
SMC4Q9NTJ3 MTND4P1-201ENST00000457501 1466 ntBASIC2.46□□□□□ -2.02
SMC4Q9NTJ3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SMC4Q9NTJ3 U3.9-201ENST00000363823 204 ntBASIC2.46□□□□□ -2.02
SMC4Q9NTJ3 RNU6-26P-201ENST00000383985 107 ntBASIC2.46□□□□□ -2.02
SMC4Q9NTJ3 FGF7P8-201ENST00000402994 292 ntBASIC2.46□□□□□ -2.02
SMC4Q9NTJ3 MIR1262-201ENST00000408276 93 ntBASIC2.46□□□□□ -2.02
SMC4Q9NTJ3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.46□□□□□ -2.02
SMC4Q9NTJ3 AC130509.1-201ENST00000464158 433 ntBASIC2.46□□□□□ -2.02
SMC4Q9NTJ3 RNU6-566P-201ENST00000516790 107 ntBASIC2.46□□□□□ -2.02
SMC4Q9NTJ3 AP005639.2-201ENST00000527592 928 ntBASIC2.46□□□□□ -2.02
SMC4Q9NTJ3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.46□□□□□ -2.02
SMC4Q9NTJ3 AC011712.1-201ENST00000588959 234 ntBASIC2.46□□□□□ -2.02
SMC4Q9NTJ3 AC007229.1-201ENST00000590455 412 ntBASIC2.46□□□□□ -2.02
SMC4Q9NTJ3 RPL17P51-201ENST00000605218 238 ntBASIC2.46□□□□□ -2.02
SMC4Q9NTJ3 MIR8076-201ENST00000611401 83 ntBASIC2.46□□□□□ -2.02
SMC4Q9NTJ3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SMC4Q9NTJ3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
SMC4Q9NTJ3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 CBX3P1-201ENST00000325243 554 ntBASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 SNORA16B-201ENST00000364674 135 ntBASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 Y_RNA.279-201ENST00000364763 95 ntBASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 Y_RNA.303-201ENST00000364998 94 ntBASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 RNU6-306P-201ENST00000384617 107 ntBASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 SNORA12-201ENST00000391162 147 ntBASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 AL357139.1-201ENST00000407792 426 ntBASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 RNU2-40P-201ENST00000410833 196 ntBASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 AC012306.1-201ENST00000423267 114 ntBASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 AC116353.2-201ENST00000505332 712 ntBASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 AL117351.2-201ENST00000513571 157 ntBASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 Y_RNA.682-201ENST00000516457 100 ntBASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 RNA5SP454-201ENST00000517231 127 ntBASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 MRPS36P4-201ENST00000534436 298 ntBASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 EIF4A1P12-201ENST00000551910 141 ntBASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 AC009994.1-201ENST00000606889 253 ntBASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 AL133215.3-201ENST00000609801 448 ntBASIC2.45□□□□□ -2.02
SMC4Q9NTJ3 AC008555.8-201ENST00000623602 2168 ntBASIC2.44□□□□□ -2.02
SMC4Q9NTJ3 RNU6-1159P-201ENST00000362933 107 ntBASIC2.44□□□□□ -2.02
SMC4Q9NTJ3 RNU6-234P-201ENST00000365229 104 ntBASIC2.44□□□□□ -2.02
SMC4Q9NTJ3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SMC4Q9NTJ3 MTND3P8-201ENST00000412909 339 ntBASIC2.44□□□□□ -2.02
SMC4Q9NTJ3 AC138393.2-201ENST00000414742 246 ntBASIC2.44□□□□□ -2.02
SMC4Q9NTJ3 PDCL2P1-201ENST00000419302 352 ntBASIC2.44□□□□□ -2.02
SMC4Q9NTJ3 MTCO3P46-201ENST00000425787 232 ntBASIC2.44□□□□□ -2.02
SMC4Q9NTJ3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.44□□□□□ -2.02
SMC4Q9NTJ3 PPP1R2P5-201ENST00000457256 603 ntBASIC2.44□□□□□ -2.02
SMC4Q9NTJ3 snoU13.23-201ENST00000458863 104 ntBASIC2.44□□□□□ -2.02
SMC4Q9NTJ3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.44□□□□□ -2.02
SMC4Q9NTJ3 AC093259.1-201ENST00000509755 300 ntBASIC2.44□□□□□ -2.02
SMC4Q9NTJ3 AC005741.1-201ENST00000511094 432 ntBASIC2.44□□□□□ -2.02
SMC4Q9NTJ3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.44□□□□□ -2.02
SMC4Q9NTJ3 uc_338.20-201ENST00000621563 178 ntBASIC2.44□□□□□ -2.02
SMC4Q9NTJ3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 RNU6-1286P-201ENST00000383871 107 ntBASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 RNU6-933P-201ENST00000384424 107 ntBASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 MIR521-1-201ENST00000384902 87 ntBASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 RNA5SP465-201ENST00000391195 109 ntBASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 AL356379.1-201ENST00000414105 126 ntBASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 Z82205.1-201ENST00000428456 297 ntBASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 MTND4LP16-201ENST00000440828 295 ntBASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 PMCHL2-203ENST00000457791 237 ntBASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 AC021146.2-201ENST00000504736 556 ntBASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 RNU7-30P-201ENST00000516835 62 ntBASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 FGF7P1-201ENST00000582820 288 ntBASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 AC099654.14-201ENST00000638599 341 ntBASIC2.43□□□□□ -2.02
SMC4Q9NTJ3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 Y_RNA.123-201ENST00000363338 102 ntBASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 RNU6-1059P-201ENST00000363752 98 ntBASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 Y_RNA.184-201ENST00000363884 108 ntBASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 RNU6-784P-201ENST00000384330 106 ntBASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 Y_RNA.473-201ENST00000384333 102 ntBASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 MIR517A-201ENST00000385001 87 ntBASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 RNU6-510P-201ENST00000391239 108 ntBASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 RNA5SP450-201ENST00000411206 102 ntBASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 RPS26P42-201ENST00000413485 326 ntBASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 MTND2P29-201ENST00000438595 412 ntBASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 AC003989.2-201ENST00000440224 169 ntBASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 RPL31P58-201ENST00000469001 379 ntBASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 PRDX4P1-201ENST00000507189 574 ntBASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 SNORA20.3-201ENST00000516880 132 ntBASIC2.42□□□□□ -2.02
SMC4Q9NTJ3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 200.3 ms