Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 U2.17-201ENST00000611454 95 ntBASIC1.11□□□□□ -2.23
TREX1Q9NSU2 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.11□□□□□ -2.23
TREX1Q9NSU2 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.11□□□□□ -2.23
TREX1Q9NSU2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.1□□□□□ -2.23
TREX1Q9NSU2 RNU6-545P-201ENST00000362681 104 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 Y_RNA.796-201ENST00000364268 102 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 Y_RNA.799-201ENST00000364992 102 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 MIR548B-201ENST00000385247 97 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 RNU6-248P-201ENST00000410720 107 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.1□□□□□ -2.23
TREX1Q9NSU2 C8orf59P1-201ENST00000429930 303 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.1□□□□□ -2.23
TREX1Q9NSU2 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.1□□□□□ -2.23
TREX1Q9NSU2 AC016925.1-201ENST00000458303 298 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 RNU7-167P-201ENST00000459160 62 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 AC007547.1-201ENST00000462177 490 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
TREX1Q9NSU2 AC105417.1-201ENST00000514691 285 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.1□□□□□ -2.23
TREX1Q9NSU2 RAB11AP2-201ENST00000545905 639 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.1□□□□□ -2.23
TREX1Q9NSU2 AC012414.6-201ENST00000568241 401 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 MIR3913-1-201ENST00000577744 102 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 RPL17P51-201ENST00000605218 238 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 MIR3976-201ENST00000606807 139 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 AC064807.4-201ENST00000607201 407 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 MIR8070-201ENST00000616510 88 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 AL603755.1-201ENST00000619504 163 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 AC095038.3-201ENST00000634439 195 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 AC009541.1-201ENST00000438279 2662 ntBASIC1.1□□□□□ -2.23
TREX1Q9NSU2 RNU1-76P-201ENST00000362903 159 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 RNU6-1019P-201ENST00000364424 107 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 SNORA18.2-201ENST00000383865 132 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 Y_RNA.399-201ENST00000383955 105 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 RNU6-418P-201ENST00000384035 107 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 RNU6-331P-201ENST00000384724 107 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 RNU6-903P-201ENST00000391270 109 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.09□□□□□ -2.23
TREX1Q9NSU2 TOMM22P2-201ENST00000430735 237 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 AL358934.1-201ENST00000432346 324 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 AC245047.4-201ENST00000433189 144 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 USP9YP28-201ENST00000435142 589 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 MTND1P27-201ENST00000451117 902 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 C1DP4-201ENST00000455429 424 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 RNU7-40P-201ENST00000516397 64 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.09□□□□□ -2.23
TREX1Q9NSU2 AL137161.1-201ENST00000532231 390 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 MTCO3P23-201ENST00000561363 289 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.09□□□□□ -2.23
TREX1Q9NSU2 MIR3937-201ENST00000580135 106 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 MIR5583-1-201ENST00000580941 59 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 MIR3941-201ENST00000582572 103 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 AC072046.2-201ENST00000618366 268 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 SNORA43.4-201ENST00000629559 138 ntBASIC1.09□□□□□ -2.23
TREX1Q9NSU2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
TREX1Q9NSU2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TREX1Q9NSU2 Y_RNA.255-201ENST00000364581 97 ntBASIC1.08□□□□□ -2.24
TREX1Q9NSU2 MIR518E-201ENST00000385252 88 ntBASIC1.08□□□□□ -2.24
TREX1Q9NSU2 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.08□□□□□ -2.24
TREX1Q9NSU2 AC090960.1-201ENST00000421072 306 ntBASIC1.08□□□□□ -2.24
TREX1Q9NSU2 MTCO2P34-201ENST00000421994 607 ntBASIC1.08□□□□□ -2.24
TREX1Q9NSU2 CETN4P-201ENST00000432407 469 ntBASIC1.08□□□□□ -2.24
TREX1Q9NSU2 RPS29P28-201ENST00000446439 141 ntBASIC1.08□□□□□ -2.24
TREX1Q9NSU2 RPL39P5-202ENST00000512505 151 ntBASIC1.08□□□□□ -2.24
TREX1Q9NSU2 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.08□□□□□ -2.24
TREX1Q9NSU2 RNA5SP481-201ENST00000516814 122 ntBASIC1.08□□□□□ -2.24
TREX1Q9NSU2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.08□□□□□ -2.24
TREX1Q9NSU2 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.08□□□□□ -2.24
TREX1Q9NSU2 MTATP6P3-201ENST00000581686 676 ntBASIC1.08□□□□□ -2.24
TREX1Q9NSU2 AC009994.1-201ENST00000606889 253 ntBASIC1.08□□□□□ -2.24
TREX1Q9NSU2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.08□□□□□ -2.24
TREX1Q9NSU2 AL136221.1-201ENST00000621449 509 ntBASIC1.08□□□□□ -2.24
TREX1Q9NSU2 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.08□□□□□ -2.24
TREX1Q9NSU2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.07□□□□□ -2.24
TREX1Q9NSU2 RNU6-1120P-201ENST00000362988 108 ntBASIC1.07□□□□□ -2.24
TREX1Q9NSU2 MIR513A1-201ENST00000385138 129 ntBASIC1.07□□□□□ -2.24
TREX1Q9NSU2 SNORD73A-201ENST00000386062 65 ntBASIC1.07□□□□□ -2.24
TREX1Q9NSU2 MRPL35P1-201ENST00000404272 572 ntBASIC1.07□□□□□ -2.24
TREX1Q9NSU2 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.07□□□□□ -2.24
TREX1Q9NSU2 MTCO1P21-201ENST00000416634 589 ntBASIC1.07□□□□□ -2.24
TREX1Q9NSU2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.07□□□□□ -2.24
TREX1Q9NSU2 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.07□□□□□ -2.24
TREX1Q9NSU2 MTCO3P29-201ENST00000432119 779 ntBASIC1.07□□□□□ -2.24
TREX1Q9NSU2 NDUFA5P4-201ENST00000436704 385 ntBASIC1.07□□□□□ -2.24
TREX1Q9NSU2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.07□□□□□ -2.24
TREX1Q9NSU2 AC132479.1-201ENST00000449160 144 ntBASIC1.07□□□□□ -2.24
TREX1Q9NSU2 snoU13.6-201ENST00000458785 104 ntBASIC1.07□□□□□ -2.24
TREX1Q9NSU2 HMGN2P9-201ENST00000476875 229 ntBASIC1.07□□□□□ -2.24
TREX1Q9NSU2 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.07□□□□□ -2.24
TREX1Q9NSU2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.07□□□□□ -2.24
TREX1Q9NSU2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.07□□□□□ -2.24
TREX1Q9NSU2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.07□□□□□ -2.24
TREX1Q9NSU2 AC040904.1-201ENST00000590850 223 ntBASIC1.07□□□□□ -2.24
TREX1Q9NSU2 AC005520.5-201ENST00000613926 164 ntBASIC1.07□□□□□ -2.24
TREX1Q9NSU2 AL078604.3-201ENST00000615580 211 ntBASIC1.07□□□□□ -2.24
TREX1Q9NSU2 AC126177.8-201ENST00000618339 1015 ntBASIC1.07□□□□□ -2.24
TREX1Q9NSU2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TREX1Q9NSU2 MIR302D-201ENST00000362275 68 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms