Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AL442644.1-201ENST00000454390 3105 ntBASIC0.51□□□□□ -2.33
CISHQ9NSE2 C1DP4-201ENST00000455429 424 ntBASIC0.51□□□□□ -2.33
CISHQ9NSE2 USP9YP25-201ENST00000457708 443 ntBASIC0.51□□□□□ -2.33
CISHQ9NSE2 RNU6-498P-201ENST00000459468 107 ntBASIC0.51□□□□□ -2.33
CISHQ9NSE2 RAP1BP2-201ENST00000478270 544 ntBASIC0.51□□□□□ -2.33
CISHQ9NSE2 RNU6-1146P-201ENST00000516282 102 ntBASIC0.51□□□□□ -2.33
CISHQ9NSE2 RNU6-405P-201ENST00000516637 110 ntBASIC0.51□□□□□ -2.33
CISHQ9NSE2 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.51□□□□□ -2.33
CISHQ9NSE2 SUMO2P16-201ENST00000519475 264 ntBASIC0.51□□□□□ -2.33
CISHQ9NSE2 AC025423.5-201ENST00000550230 219 ntBASIC0.51□□□□□ -2.33
CISHQ9NSE2 AC091489.2-201ENST00000566263 604 ntBASIC0.51□□□□□ -2.33
CISHQ9NSE2 AL513534.2-201ENST00000603836 250 ntBASIC0.51□□□□□ -2.33
CISHQ9NSE2 AC022709.1-201ENST00000615967 87 ntBASIC0.51□□□□□ -2.33
CISHQ9NSE2 AC104010.1-201ENST00000616889 150 ntBASIC0.51□□□□□ -2.33
CISHQ9NSE2 AL031667.3-201ENST00000620124 655 ntBASIC0.51□□□□□ -2.33
CISHQ9NSE2 MIR6734-201ENST00000621166 68 ntBASIC0.51□□□□□ -2.33
CISHQ9NSE2 RNU6-428P-201ENST00000362942 107 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 Y_RNA.124-201ENST00000363339 93 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 Y_RNA.354-201ENST00000365448 111 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 Y_RNA.576-201ENST00000384781 102 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 MIR208B-201ENST00000401172 77 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 MIR1283-1-201ENST00000408494 87 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 RNU6-733P-201ENST00000410759 104 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 RPS3AP1-201ENST00000413190 320 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 AL117339.3-201ENST00000418733 162 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 AC011233.1-201ENST00000422812 283 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 HSFY7P-201ENST00000432672 318 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 HSFY8P-201ENST00000437934 318 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 SRRM1P2-201ENST00000464531 1192 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 AC008628.2-201ENST00000502605 298 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 AC116562.3-201ENST00000506136 177 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.5□□□□□ -2.33
CISHQ9NSE2 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.5□□□□□ -2.33
CISHQ9NSE2 SNORD79.1-201ENST00000516069 84 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 RNU6-229P-201ENST00000516614 102 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 AC068587.5-201ENST00000528506 175 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 AL590705.4-201ENST00000532209 134 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 AL121579.1-201ENST00000555129 305 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 MIR4753-201ENST00000585119 83 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 Z99289.3-201ENST00000605586 594 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 AC018645.2-201ENST00000609151 472 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 AL139418.1-201ENST00000613613 177 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.5□□□□□ -2.33
CISHQ9NSE2 MIR6513-201ENST00000621188 64 ntBASIC0.5□□□□□ -2.33
CISHQ9NSE2 MTND5P17-201ENST00000418405 1603 ntBASIC0.49□□□□□ -2.33
CISHQ9NSE2 RNU6-42P-201ENST00000384165 107 ntBASIC0.49□□□□□ -2.33
CISHQ9NSE2 RNU6-1031P-201ENST00000384773 107 ntBASIC0.49□□□□□ -2.33
CISHQ9NSE2 MIR518E-201ENST00000385252 88 ntBASIC0.49□□□□□ -2.33
CISHQ9NSE2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.49□□□□□ -2.33
CISHQ9NSE2 HMGN2P34-201ENST00000437647 269 ntBASIC0.49□□□□□ -2.33
CISHQ9NSE2 AC073614.1-201ENST00000438690 650 ntBASIC0.49□□□□□ -2.33
CISHQ9NSE2 AC245047.7-201ENST00000440265 293 ntBASIC0.49□□□□□ -2.33
CISHQ9NSE2 RNA5SP436-201ENST00000516020 115 ntBASIC0.49□□□□□ -2.33
CISHQ9NSE2 RNU6-948P-201ENST00000516374 107 ntBASIC0.49□□□□□ -2.33
CISHQ9NSE2 AP003181.2-201ENST00000528941 181 ntBASIC0.49□□□□□ -2.33
CISHQ9NSE2 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.49□□□□□ -2.33
CISHQ9NSE2 AC008250.2-201ENST00000615261 205 ntBASIC0.49□□□□□ -2.33
CISHQ9NSE2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CISHQ9NSE2 AL391994.1-201ENST00000254724 282 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 RNU6-545P-201ENST00000362681 104 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 RNA5SP361-201ENST00000362686 118 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 RNU6-660P-201ENST00000364566 109 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 SNORD115-7-201ENST00000365306 82 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 RNU6-116P-201ENST00000384042 109 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
CISHQ9NSE2 RNU2-8P-201ENST00000410727 190 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 AC114737.2-201ENST00000421583 173 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 MTATP6P16-201ENST00000434543 526 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.48□□□□□ -2.33
CISHQ9NSE2 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.48□□□□□ -2.33
CISHQ9NSE2 RNU6-1132P-201ENST00000459214 107 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.48□□□□□ -2.33
CISHQ9NSE2 AC048334.1-201ENST00000477975 159 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 COX6CP6-201ENST00000490840 228 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 AC091435.1-201ENST00000505442 584 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 AC079140.5-201ENST00000507882 310 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.48□□□□□ -2.33
CISHQ9NSE2 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.48□□□□□ -2.33
CISHQ9NSE2 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.48□□□□□ -2.33
CISHQ9NSE2 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.48□□□□□ -2.33
CISHQ9NSE2 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.48□□□□□ -2.33
CISHQ9NSE2 TPRKBP2-201ENST00000565969 475 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 AL929325.1-201ENST00000603096 117 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 AC091805.2-201ENST00000603848 235 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 GHRLOS.1-201ENST00000610995 70 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 AC138749.5-201ENST00000611461 208 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 AC116165.2-201ENST00000616705 206 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 AL607023.1-201ENST00000620045 248 ntBASIC0.48□□□□□ -2.33
CISHQ9NSE2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CISHQ9NSE2 RNY1P12-201ENST00000364251 105 ntBASIC0.47□□□□□ -2.33
CISHQ9NSE2 Y_RNA.504-201ENST00000384481 104 ntBASIC0.47□□□□□ -2.33
CISHQ9NSE2 RNU6-110P-201ENST00000384508 104 ntBASIC0.47□□□□□ -2.33
CISHQ9NSE2 RNU6-83P-201ENST00000384568 112 ntBASIC0.47□□□□□ -2.33
CISHQ9NSE2 AC012306.1-201ENST00000423267 114 ntBASIC0.47□□□□□ -2.33
CISHQ9NSE2 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.47□□□□□ -2.33
CISHQ9NSE2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.47□□□□□ -2.33
CISHQ9NSE2 EXOSC3P1-201ENST00000448649 500 ntBASIC0.47□□□□□ -2.33
CISHQ9NSE2 snoU109.3-201ENST00000459477 145 ntBASIC0.47□□□□□ -2.33
CISHQ9NSE2 AC092991.1-201ENST00000477176 376 ntBASIC0.47□□□□□ -2.33
CISHQ9NSE2 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms