Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TAF9P1-201ENST00000445421 515 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 MTCO3P8-201ENST00000453691 755 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 TAF9P2-201ENST00000454958 515 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 RNU7-90P-201ENST00000459216 62 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 SNORA70.12-201ENST00000516084 153 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 RNU1-142P-201ENST00000516682 145 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 RNU2-46P-201ENST00000517038 113 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 RNU6-323P-201ENST00000521915 107 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 AC004584.2-201ENST00000570407 410 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 MIR4778-201ENST00000577635 80 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 LARP7P3-201ENST00000579888 337 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 MIR5006-201ENST00000583027 110 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 AC242498.1-201ENST00000604134 111 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 AC027807.2-201ENST00000616099 408 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 AC243994.1-201ENST00000618627 109 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 AC139792.3-201ENST00000623525 224 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 AC008873.1-201ENST00000625051 138 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 AC006927.3-201ENST00000638789 384 ntBASIC0.25□□□□□ -2.37
CDC42SE1Q9NRR8 RNU5B-2P-201ENST00000363036 113 ntBASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 RNU6-266P-201ENST00000364225 107 ntBASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 RNU6-393P-201ENST00000384475 107 ntBASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 MIR454-201ENST00000390180 115 ntBASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 MTCO2P34-201ENST00000421994 607 ntBASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 AL356583.2-201ENST00000426536 280 ntBASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 FABP5P4-201ENST00000437203 171 ntBASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 AC233266.1-201ENST00000454518 96 ntBASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 RNU7-57P-201ENST00000459540 60 ntBASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 AC025465.4-201ENST00000513422 638 ntBASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 RNU6-947P-201ENST00000516264 106 ntBASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 AP002001.1-203ENST00000534002 267 ntBASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 AC004832.4-201ENST00000608952 331 ntBASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 AC242852.1-201ENST00000612151 96 ntBASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 MIR6845-201ENST00000613182 61 ntBASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 AL359075.3-201ENST00000613288 217 ntBASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 AC093913.1-201ENST00000614178 329 ntBASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 AL353770.2-201ENST00000620024 78 ntBASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 AL049777.1-201ENST00000622740 518 ntBASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.24□□□□□ -2.37
CDC42SE1Q9NRR8 RNY1P12-201ENST00000364251 105 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 RNU5E-5P-201ENST00000365379 116 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 RNU6-434P-201ENST00000384376 107 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 SNORD70.1-201ENST00000391007 85 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 RPL17P50-201ENST00000396131 546 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 MIR1253-201ENST00000408273 105 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 RNU4-46P-201ENST00000410818 138 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 AC009474.2-201ENST00000451383 136 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 AC245047.8-201ENST00000456455 284 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 RNU6-221P-201ENST00000459541 99 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 RPS29P27-201ENST00000463711 170 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 AC007215.1-201ENST00000464893 276 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 RN7SKP219-201ENST00000516825 296 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 AC027419.1-201ENST00000522976 328 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 AC027807.1-201ENST00000559921 996 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 MIR4509-3-201ENST00000578671 94 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 MIR4509-2-201ENST00000583920 94 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 AC011494.1-201ENST00000596454 237 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 AC068790.2-201ENST00000602601 557 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 AL357312.1-201ENST00000603879 298 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 AC012557.2-201ENST00000605919 418 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 AL096861.1-201ENST00000610899 123 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 AC108706.1-201ENST00000611053 297 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 MIR378J-201ENST00000611988 109 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 AL391903.3-201ENST00000612158 163 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 MIR4509-1-201ENST00000618224 94 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 snoZ196.1-201ENST00000625269 89 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 U6.114-201ENST00000636407 96 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 AC134026.1-201ENST00000623249 2239 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 OR4G1P-203ENST00000641984 1631 ntBASIC0.23□□□□□ -2.37
CDC42SE1Q9NRR8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 SNORA2.2-201ENST00000365473 135 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 RNU6-1029P-201ENST00000384109 107 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 RNU1-119P-201ENST00000391122 165 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 AL451046.2-201ENST00000403074 277 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 SNORD99-201ENST00000408612 74 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 RNA5SP504-201ENST00000410676 117 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 CDK8P2-201ENST00000415020 547 ntBASIC0.22□□□□□ -2.37
CDC42SE1Q9NRR8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms