Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 RPL30P16-201ENST00000419341 429 ntBASIC1.85□□□□□ -2.11
RNF41Q9H4P4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.85□□□□□ -2.11
RNF41Q9H4P4 MTND3P9-201ENST00000429526 346 ntBASIC1.85□□□□□ -2.11
RNF41Q9H4P4 NFU1P2-201ENST00000448700 469 ntBASIC1.85□□□□□ -2.11
RNF41Q9H4P4 MTCO1P29-201ENST00000496868 288 ntBASIC1.85□□□□□ -2.11
RNF41Q9H4P4 AC096745.1-201ENST00000509945 370 ntBASIC1.85□□□□□ -2.11
RNF41Q9H4P4 RNU6-1088P-201ENST00000516850 104 ntBASIC1.85□□□□□ -2.11
RNF41Q9H4P4 AF235103.2-201ENST00000525753 346 ntBASIC1.85□□□□□ -2.11
RNF41Q9H4P4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.85□□□□□ -2.11
RNF41Q9H4P4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.85□□□□□ -2.11
RNF41Q9H4P4 SNORD53B-201ENST00000577887 78 ntBASIC1.85□□□□□ -2.11
RNF41Q9H4P4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.85□□□□□ -2.11
RNF41Q9H4P4 Z98751.3-201ENST00000604447 521 ntBASIC1.85□□□□□ -2.11
RNF41Q9H4P4 PCGEM1.1-201ENST00000613431 131 ntBASIC1.85□□□□□ -2.11
RNF41Q9H4P4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
RNF41Q9H4P4 AC005520.5-201ENST00000613926 164 ntBASIC1.85□□□□□ -2.11
RNF41Q9H4P4 AL136221.1-201ENST00000621449 509 ntBASIC1.85□□□□□ -2.11
RNF41Q9H4P4 AL359757.2-201ENST00000624309 274 ntBASIC1.85□□□□□ -2.11
RNF41Q9H4P4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.85□□□□□ -2.11
RNF41Q9H4P4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
RNF41Q9H4P4 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RNF41Q9H4P4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.84□□□□□ -2.11
RNF41Q9H4P4 ZNF72P-201ENST00000425869 1908 ntBASIC1.84□□□□□ -2.11
RNF41Q9H4P4 RNU5B-2P-201ENST00000363036 113 ntBASIC1.84□□□□□ -2.11
RNF41Q9H4P4 Y_RNA.151-201ENST00000363566 112 ntBASIC1.84□□□□□ -2.11
RNF41Q9H4P4 MIR517C-201ENST00000385103 95 ntBASIC1.84□□□□□ -2.11
RNF41Q9H4P4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.84□□□□□ -2.11
RNF41Q9H4P4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.84□□□□□ -2.11
RNF41Q9H4P4 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.84□□□□□ -2.11
RNF41Q9H4P4 RNU6-358P-201ENST00000516564 75 ntBASIC1.84□□□□□ -2.11
RNF41Q9H4P4 RNU6-965P-201ENST00000516721 96 ntBASIC1.84□□□□□ -2.11
RNF41Q9H4P4 RNA5SP137-201ENST00000516833 135 ntBASIC1.84□□□□□ -2.11
RNF41Q9H4P4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.84□□□□□ -2.11
RNF41Q9H4P4 AC107953.1-201ENST00000522216 297 ntBASIC1.84□□□□□ -2.11
RNF41Q9H4P4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.84□□□□□ -2.11
RNF41Q9H4P4 MIR3122-201ENST00000577243 73 ntBASIC1.84□□□□□ -2.11
RNF41Q9H4P4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.84□□□□□ -2.11
RNF41Q9H4P4 AC018638.8-201ENST00000588755 281 ntBASIC1.84□□□□□ -2.11
RNF41Q9H4P4 AL670379.2-201ENST00000604983 252 ntBASIC1.84□□□□□ -2.11
RNF41Q9H4P4 MIR8076-201ENST00000611401 83 ntBASIC1.84□□□□□ -2.11
RNF41Q9H4P4 AC084782.3-201ENST00000612282 578 ntBASIC1.84□□□□□ -2.11
RNF41Q9H4P4 AL359314.1-201ENST00000616913 261 ntBASIC1.84□□□□□ -2.11
RNF41Q9H4P4 AC009541.1-201ENST00000438279 2662 ntBASIC1.84□□□□□ -2.11
RNF41Q9H4P4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.84□□□□□ -2.12
RNF41Q9H4P4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RNF41Q9H4P4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RNF41Q9H4P4 SNORA29-201ENST00000384183 140 ntBASIC1.83□□□□□ -2.12
RNF41Q9H4P4 RNU6-378P-201ENST00000384324 107 ntBASIC1.83□□□□□ -2.12
RNF41Q9H4P4 RNU6-784P-201ENST00000384330 106 ntBASIC1.83□□□□□ -2.12
RNF41Q9H4P4 RNA5SP213-201ENST00000391031 106 ntBASIC1.83□□□□□ -2.12
RNF41Q9H4P4 BTF3L4P2-201ENST00000392798 346 ntBASIC1.83□□□□□ -2.12
RNF41Q9H4P4 MIR1262-201ENST00000408276 93 ntBASIC1.83□□□□□ -2.12
RNF41Q9H4P4 U8.21-201ENST00000459536 136 ntBASIC1.83□□□□□ -2.12
RNF41Q9H4P4 AC021146.2-201ENST00000504736 556 ntBASIC1.83□□□□□ -2.12
RNF41Q9H4P4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.83□□□□□ -2.12
RNF41Q9H4P4 RNU2-19P-201ENST00000517288 84 ntBASIC1.83□□□□□ -2.12
RNF41Q9H4P4 MRPS36P4-201ENST00000534436 298 ntBASIC1.83□□□□□ -2.12
RNF41Q9H4P4 AC016256.1-201ENST00000547971 354 ntBASIC1.83□□□□□ -2.12
RNF41Q9H4P4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.83□□□□□ -2.12
RNF41Q9H4P4 AC021231.3-201ENST00000558497 370 ntBASIC1.83□□□□□ -2.12
RNF41Q9H4P4 SNORA59B-202ENST00000578183 701 ntBASIC1.83□□□□□ -2.12
RNF41Q9H4P4 MIR3923-201ENST00000579521 83 ntBASIC1.83□□□□□ -2.12
RNF41Q9H4P4 AC010928.2-201ENST00000588017 287 ntBASIC1.83□□□□□ -2.12
RNF41Q9H4P4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.83□□□□□ -2.12
RNF41Q9H4P4 uc_338.5-201ENST00000611839 155 ntBASIC1.83□□□□□ -2.12
RNF41Q9H4P4 AC009033.1-201ENST00000624279 431 ntBASIC1.83□□□□□ -2.12
RNF41Q9H4P4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
RNF41Q9H4P4 MTND4P5-201ENST00000435821 1374 ntBASIC1.83□□□□□ -2.12
RNF41Q9H4P4 RNU6-562P-201ENST00000362731 107 ntBASIC1.82□□□□□ -2.12
RNF41Q9H4P4 Y_RNA.86-201ENST00000363020 111 ntBASIC1.82□□□□□ -2.12
RNF41Q9H4P4 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RNF41Q9H4P4 HMGN2P39-201ENST00000398005 273 ntBASIC1.82□□□□□ -2.12
RNF41Q9H4P4 AC012306.1-201ENST00000423267 114 ntBASIC1.82□□□□□ -2.12
RNF41Q9H4P4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.82□□□□□ -2.12
RNF41Q9H4P4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.82□□□□□ -2.12
RNF41Q9H4P4 FGF7P1-201ENST00000582820 288 ntBASIC1.82□□□□□ -2.12
RNF41Q9H4P4 AC007229.1-201ENST00000590455 412 ntBASIC1.82□□□□□ -2.12
RNF41Q9H4P4 SNRPGP17-201ENST00000603780 214 ntBASIC1.82□□□□□ -2.12
RNF41Q9H4P4 MIR3976-201ENST00000606807 139 ntBASIC1.82□□□□□ -2.12
RNF41Q9H4P4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.82□□□□□ -2.12
RNF41Q9H4P4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.82□□□□□ -2.12
RNF41Q9H4P4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
RNF41Q9H4P4 SNORD50.1-201ENST00000362987 71 ntBASIC1.81□□□□□ -2.12
RNF41Q9H4P4 RNA5SP99-201ENST00000364020 114 ntBASIC1.81□□□□□ -2.12
RNF41Q9H4P4 Y_RNA.248-201ENST00000364501 109 ntBASIC1.81□□□□□ -2.12
RNF41Q9H4P4 SNORA67.6-201ENST00000391093 99 ntBASIC1.81□□□□□ -2.12
RNF41Q9H4P4 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.81□□□□□ -2.12
RNF41Q9H4P4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.81□□□□□ -2.12
RNF41Q9H4P4 PRELID3BP1-201ENST00000457142 540 ntBASIC1.81□□□□□ -2.12
RNF41Q9H4P4 RNU6-329P-201ENST00000459618 107 ntBASIC1.81□□□□□ -2.12
RNF41Q9H4P4 MTCO2P30-201ENST00000503662 364 ntBASIC1.81□□□□□ -2.12
RNF41Q9H4P4 MIR449C-201ENST00000516047 92 ntBASIC1.81□□□□□ -2.12
RNF41Q9H4P4 RNU4-49P-201ENST00000516080 140 ntBASIC1.81□□□□□ -2.12
RNF41Q9H4P4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.81□□□□□ -2.12
RNF41Q9H4P4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.81□□□□□ -2.12
RNF41Q9H4P4 CYP4A27P-201ENST00000567218 190 ntBASIC1.81□□□□□ -2.12
RNF41Q9H4P4 MIR3126-201ENST00000577443 74 ntBASIC1.81□□□□□ -2.12
RNF41Q9H4P4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.81□□□□□ -2.12
RNF41Q9H4P4 AC009994.1-201ENST00000606889 253 ntBASIC1.81□□□□□ -2.12
RNF41Q9H4P4 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms