Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.14□□□□□ -1.75
UBE2OQ9C0C9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBE2OQ9C0C9 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBE2OQ9C0C9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBE2OQ9C0C9 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.14□□□□□ -1.75
UBE2OQ9C0C9 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.14□□□□□ -1.75
UBE2OQ9C0C9 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UBE2OQ9C0C9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UBE2OQ9C0C9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
UBE2OQ9C0C9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UBE2OQ9C0C9 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
UBE2OQ9C0C9 SNORA7.2-201ENST00000364446 145 ntBASIC4.13□□□□□ -1.75
UBE2OQ9C0C9 RNU6-487P-201ENST00000365430 104 ntBASIC4.13□□□□□ -1.75
UBE2OQ9C0C9 SNORA72.4-201ENST00000384174 132 ntBASIC4.13□□□□□ -1.75
UBE2OQ9C0C9 COTL1P1-201ENST00000422309 375 ntBASIC4.13□□□□□ -1.75
UBE2OQ9C0C9 CYCSP4-201ENST00000429682 331 ntBASIC4.13□□□□□ -1.75
UBE2OQ9C0C9 PDCD5P2-201ENST00000507570 312 ntBASIC4.13□□□□□ -1.75
UBE2OQ9C0C9 RNU2-27P-201ENST00000516185 142 ntBASIC4.13□□□□□ -1.75
UBE2OQ9C0C9 AC005520.5-201ENST00000613926 164 ntBASIC4.13□□□□□ -1.75
UBE2OQ9C0C9 U7.8-201ENST00000619968 63 ntBASIC4.13□□□□□ -1.75
UBE2OQ9C0C9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UBE2OQ9C0C9 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
UBE2OQ9C0C9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 SNORA63.4-201ENST00000362763 126 ntBASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 RNU6-1048P-201ENST00000364054 107 ntBASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 SNORD115-30-201ENST00000364117 82 ntBASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 Y_RNA.287-201ENST00000364853 94 ntBASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 Y_RNA.293-201ENST00000364908 93 ntBASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 RNU6-1056P-201ENST00000383996 107 ntBASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 AL355497.1-201ENST00000406262 551 ntBASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 AC083863.1-201ENST00000438811 231 ntBASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 HMGN2P10-201ENST00000448085 265 ntBASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 AC092991.1-201ENST00000477176 376 ntBASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 AC103975.1-201ENST00000482506 483 ntBASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 RPS29P20-201ENST00000489592 171 ntBASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 MIR4325-201ENST00000583049 90 ntBASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 AL391813.1-201ENST00000603098 260 ntBASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 RNU1-30P-201ENST00000606575 163 ntBASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 MIR486-1-201ENST00000612171 68 ntBASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 SNORD98-201ENST00000636377 67 ntBASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UBE2OQ9C0C9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 RNA5SP432-201ENST00000362480 116 ntBASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 RNU6-429P-201ENST00000384582 108 ntBASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 MIR208B-201ENST00000401172 77 ntBASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 AL031003.1-201ENST00000404229 172 ntBASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 AC006461.1-201ENST00000412637 326 ntBASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 AC017083.1-201ENST00000428093 483 ntBASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 AL645939.1-201ENST00000453429 797 ntBASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 RNU7-170P-201ENST00000459303 61 ntBASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 RNU6-1007P-201ENST00000516586 107 ntBASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 AL773545.4-201ENST00000637262 310 ntBASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 AL513478.4-201ENST00000641636 310 ntBASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 AF127577.6-201ENST00000623352 2191 ntBASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.11□□□□□ -1.75
UBE2OQ9C0C9 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 MFSD8-236ENST00000641509 4050 ntBASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 Y_RNA.24-201ENST00000362508 103 ntBASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 U3.15-201ENST00000365398 212 ntBASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 MIR616-201ENST00000385293 97 ntBASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 RNY4P18-201ENST00000391107 89 ntBASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 RPL31P41-201ENST00000477967 372 ntBASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 SNRPGP20-201ENST00000604477 205 ntBASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 Y_RNA.802-201ENST00000614892 130 ntBASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 MIR6715A-201ENST00000615929 79 ntBASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 OTUD4P1-201ENST00000237841 3067 ntBASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
UBE2OQ9C0C9 MAPK10-373ENST00000641983 6772 ntBASIC4.09□□□□□ -1.75
UBE2OQ9C0C9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
UBE2OQ9C0C9 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
UBE2OQ9C0C9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
UBE2OQ9C0C9 SNORD9-201ENST00000362566 104 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms