Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.94□□□□□ -1.78
TRAIPQ9BWF2 RNU4-90P-201ENST00000362773 141 ntBASIC3.94□□□□□ -1.78
TRAIPQ9BWF2 SNORA9-201ENST00000384215 133 ntBASIC3.94□□□□□ -1.78
TRAIPQ9BWF2 AL353705.1-201ENST00000433468 480 ntBASIC3.94□□□□□ -1.78
TRAIPQ9BWF2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.94□□□□□ -1.78
TRAIPQ9BWF2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.94□□□□□ -1.78
TRAIPQ9BWF2 PHBP14-201ENST00000512887 367 ntBASIC3.94□□□□□ -1.78
TRAIPQ9BWF2 SNORA31.26-201ENST00000517250 137 ntBASIC3.94□□□□□ -1.78
TRAIPQ9BWF2 AC093331.1-201ENST00000521474 169 ntBASIC3.94□□□□□ -1.78
TRAIPQ9BWF2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.94□□□□□ -1.78
TRAIPQ9BWF2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.94□□□□□ -1.78
TRAIPQ9BWF2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRAIPQ9BWF2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
TRAIPQ9BWF2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 Y_RNA.26-201ENST00000362539 101 ntBASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 Y_RNA.376-201ENST00000365638 108 ntBASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 RPL23AP83-201ENST00000434984 473 ntBASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 HMGN2P18-201ENST00000450680 270 ntBASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 RNU6-579P-201ENST00000516879 102 ntBASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 AP006245.1-201ENST00000522549 120 ntBASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 AC004467.1-201ENST00000615678 330 ntBASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 MIR1248-201ENST00000629190 106 ntBASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 AC073346.2-201ENST00000624724 2058 ntBASIC3.93□□□□□ -1.78
TRAIPQ9BWF2 AC131280.1-202ENST00000624067 4211 ntBASIC3.92□□□□□ -1.78
TRAIPQ9BWF2 RNU1-33P-201ENST00000364249 162 ntBASIC3.92□□□□□ -1.78
TRAIPQ9BWF2 Y_RNA.331-201ENST00000365267 102 ntBASIC3.92□□□□□ -1.78
TRAIPQ9BWF2 RN7SKP111-201ENST00000410349 271 ntBASIC3.92□□□□□ -1.78
TRAIPQ9BWF2 RNU6-121P-201ENST00000410525 99 ntBASIC3.92□□□□□ -1.78
TRAIPQ9BWF2 RPL21P38-201ENST00000418090 167 ntBASIC3.92□□□□□ -1.78
TRAIPQ9BWF2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.92□□□□□ -1.78
TRAIPQ9BWF2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
TRAIPQ9BWF2 AC008011.1-201ENST00000545989 227 ntBASIC3.92□□□□□ -1.78
TRAIPQ9BWF2 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
TRAIPQ9BWF2 AC000403.1-201ENST00000613696 3585 ntBASIC3.92□□□□□ -1.78
TRAIPQ9BWF2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
TRAIPQ9BWF2 Y_RNA.105-201ENST00000363182 111 ntBASIC3.91□□□□□ -1.78
TRAIPQ9BWF2 RNA5SP267-201ENST00000364893 126 ntBASIC3.91□□□□□ -1.78
TRAIPQ9BWF2 Y_RNA.570-201ENST00000384750 101 ntBASIC3.91□□□□□ -1.78
TRAIPQ9BWF2 SNORA53-201ENST00000391141 249 ntBASIC3.91□□□□□ -1.78
TRAIPQ9BWF2 AC005042.3-201ENST00000453230 174 ntBASIC3.91□□□□□ -1.78
TRAIPQ9BWF2 AC098869.1-201ENST00000481627 292 ntBASIC3.91□□□□□ -1.78
TRAIPQ9BWF2 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.91□□□□□ -1.78
TRAIPQ9BWF2 RNU6-667P-201ENST00000517186 102 ntBASIC3.91□□□□□ -1.78
TRAIPQ9BWF2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.91□□□□□ -1.78
TRAIPQ9BWF2 AL161756.2-201ENST00000604597 246 ntBASIC3.91□□□□□ -1.78
TRAIPQ9BWF2 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.91□□□□□ -1.78
TRAIPQ9BWF2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.91□□□□□ -1.78
TRAIPQ9BWF2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRAIPQ9BWF2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRAIPQ9BWF2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRAIPQ9BWF2 AC092593.1-201ENST00000515413 1815 ntBASIC3.91□□□□□ -1.78
TRAIPQ9BWF2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
TRAIPQ9BWF2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TRAIPQ9BWF2 SNORD81.1-201ENST00000363064 77 ntBASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 SNORA67.2-201ENST00000384300 149 ntBASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 RNVU1-14-201ENST00000384770 164 ntBASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 MIR490-201ENST00000384865 128 ntBASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 Y_RNA.581-201ENST00000391017 97 ntBASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 AL137159.1-201ENST00000452808 512 ntBASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 RNU7-57P-201ENST00000459540 60 ntBASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 HMGN2P9-201ENST00000476875 229 ntBASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 RNU6-948P-201ENST00000516374 107 ntBASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 AL109918.3-201ENST00000603072 338 ntBASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 AP003355.3-201ENST00000623465 114 ntBASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRAIPQ9BWF2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRAIPQ9BWF2 MIR410-201ENST00000362222 80 ntBASIC3.89□□□□□ -1.79
TRAIPQ9BWF2 RNA5SP50-201ENST00000363731 107 ntBASIC3.89□□□□□ -1.79
TRAIPQ9BWF2 SNORA25B-201ENST00000365507 128 ntBASIC3.89□□□□□ -1.79
TRAIPQ9BWF2 Y_RNA.396-201ENST00000383949 103 ntBASIC3.89□□□□□ -1.79
TRAIPQ9BWF2 RNU4-30P-201ENST00000410245 143 ntBASIC3.89□□□□□ -1.79
TRAIPQ9BWF2 NDUFB1P1-201ENST00000435191 180 ntBASIC3.89□□□□□ -1.79
TRAIPQ9BWF2 RPS29P26-201ENST00000477483 171 ntBASIC3.89□□□□□ -1.79
TRAIPQ9BWF2 ATP5EP1-201ENST00000510257 156 ntBASIC3.89□□□□□ -1.79
TRAIPQ9BWF2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.89□□□□□ -1.79
TRAIPQ9BWF2 MIR4423-201ENST00000580922 80 ntBASIC3.89□□□□□ -1.79
TRAIPQ9BWF2 AC091932.3-201ENST00000624223 323 ntBASIC3.89□□□□□ -1.79
TRAIPQ9BWF2 MFSD8-236ENST00000641509 4050 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms