Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ZKSCAN3Q9BRR0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ZKSCAN3Q9BRR0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
ZKSCAN3Q9BRR0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
ZKSCAN3Q9BRR0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 MFSD8-233ENST00000641482 4860 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 Y_RNA.75-201ENST00000362927 97 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 Y_RNA.415-201ENST00000384012 112 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 RNU2-2P-201ENST00000410396 191 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 AC011471.1-201ENST00000585766 187 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 AC110741.2-201ENST00000605278 268 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 RNU2-4P-201ENST00000606190 192 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 U2.15-201ENST00000611544 191 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 U2.16-201ENST00000613119 191 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 U2.12-201ENST00000613778 191 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 U2.9-201ENST00000615427 191 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 U2.11-201ENST00000616345 191 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 U2.2-201ENST00000616535 191 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 U2.3-201ENST00000617785 191 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 U2.19-201ENST00000618602 191 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 RNU2-1-201ENST00000618664 191 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 U2.6-201ENST00000619225 191 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 U2.5-201ENST00000619465 191 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 U2.10-201ENST00000620268 191 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 AL356274.2-201ENST00000624379 3752 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 AF117829.1-206ENST00000621883 3802 ntBASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.97□□□□□ -1.77
ZKSCAN3Q9BRR0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.77
ZKSCAN3Q9BRR0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 RNU6-1010P-201ENST00000362757 107 ntBASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 RNU6-324P-201ENST00000363957 106 ntBASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 SNORD50B-201ENST00000364995 70 ntBASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 Y_RNA.357-201ENST00000365487 109 ntBASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 Y_RNA.400-201ENST00000383963 111 ntBASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 AL138878.1-201ENST00000405131 347 ntBASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 U3.40-201ENST00000408706 208 ntBASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 RNA5SP201-201ENST00000410316 124 ntBASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 AC023141.4-201ENST00000412031 328 ntBASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 snoU13.14-201ENST00000459372 104 ntBASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 Y_RNA.637-201ENST00000459424 114 ntBASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 RNU6-436P-201ENST00000516171 114 ntBASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 RNU6-107P-201ENST00000516643 102 ntBASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 TGIF1P1-201ENST00000558095 802 ntBASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 SNORD11B-201ENST00000607707 90 ntBASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 PCGEM1.1-201ENST00000613431 131 ntBASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 AL078604.3-201ENST00000615580 211 ntBASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 MIR8058-201ENST00000615737 89 ntBASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ZKSCAN3Q9BRR0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ZKSCAN3Q9BRR0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
ZKSCAN3Q9BRR0 Y_RNA.182-201ENST00000363880 111 ntBASIC3.95□□□□□ -1.78
ZKSCAN3Q9BRR0 SNORD46.1-201ENST00000364139 104 ntBASIC3.95□□□□□ -1.78
ZKSCAN3Q9BRR0 Y_RNA.412-201ENST00000384001 104 ntBASIC3.95□□□□□ -1.78
ZKSCAN3Q9BRR0 Y_RNA.488-201ENST00000384403 102 ntBASIC3.95□□□□□ -1.78
ZKSCAN3Q9BRR0 Y_RNA.497-201ENST00000384447 98 ntBASIC3.95□□□□□ -1.78
ZKSCAN3Q9BRR0 AC091153.1-201ENST00000466297 402 ntBASIC3.95□□□□□ -1.78
ZKSCAN3Q9BRR0 RPL30P14-201ENST00000482744 348 ntBASIC3.95□□□□□ -1.78
ZKSCAN3Q9BRR0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.95□□□□□ -1.78
ZKSCAN3Q9BRR0 RNU6-344P-201ENST00000516635 111 ntBASIC3.95□□□□□ -1.78
ZKSCAN3Q9BRR0 MIR2276-201ENST00000516886 89 ntBASIC3.95□□□□□ -1.78
ZKSCAN3Q9BRR0 MIR4276-201ENST00000584832 70 ntBASIC3.95□□□□□ -1.78
ZKSCAN3Q9BRR0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.95□□□□□ -1.78
ZKSCAN3Q9BRR0 AC002076.2-201ENST00000617362 122 ntBASIC3.95□□□□□ -1.78
ZKSCAN3Q9BRR0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
ZKSCAN3Q9BRR0 AL049781.1-201ENST00000623195 3585 ntBASIC3.95□□□□□ -1.78
ZKSCAN3Q9BRR0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 MIR30E-201ENST00000362104 92 ntBASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 RNU4-84P-201ENST00000364200 139 ntBASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 RNA5SP267-201ENST00000364893 126 ntBASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 SNORA70.4-201ENST00000365509 134 ntBASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 AL133475.1-201ENST00000404414 305 ntBASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 HSPE1P26-201ENST00000405341 275 ntBASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 RNU2-51P-201ENST00000410708 197 ntBASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 AC126124.2-201ENST00000413542 321 ntBASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 RPS4XP2-201ENST00000458402 793 ntBASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 AC100767.1-201ENST00000528178 123 ntBASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 EIF4A1P12-201ENST00000551910 141 ntBASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 AC012493.2-201ENST00000595083 291 ntBASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 AC005562.2-201ENST00000618264 111 ntBASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
ZKSCAN3Q9BRR0 RNU1-70P-201ENST00000362618 164 ntBASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 SNORD114-19-201ENST00000363072 75 ntBASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 RNU6-529P-201ENST00000363383 104 ntBASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 RNA5SP387-201ENST00000364226 106 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms