Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 FO393415.2-201ENST00000480085 343 ntBASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 HSPE1P4-201ENST00000550617 308 ntBASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 AC109446.1-201ENST00000566172 220 ntBASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 MIR4273-201ENST00000582824 84 ntBASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 AC098657.3-201ENST00000620434 263 ntBASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 AC090574.1-201ENST00000623186 233 ntBASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 AC009541.1-201ENST00000438279 2662 ntBASIC2.3□□□□□ -2.04
RTP3Q9BQQ7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 Y_RNA.48-201ENST00000362710 103 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 RNU1-72P-201ENST00000362976 153 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 Y_RNA.123-201ENST00000363338 102 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 RNU6-694P-201ENST00000364071 147 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 SNORA80E-201ENST00000384744 137 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 RNU6-174P-201ENST00000410406 106 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 RN7SKP61-201ENST00000410642 295 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 AC078809.1-201ENST00000427601 140 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 AC244670.1-201ENST00000436879 112 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 RN7SKP210-201ENST00000459176 261 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 AL121594.1-201ENST00000475906 575 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 RPL30P1-201ENST00000488676 339 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 AC090096.1-201ENST00000489168 390 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 RNU5F-2P-201ENST00000516066 82 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 RNU2-53P-201ENST00000516257 147 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 RNA5SP384-201ENST00000516615 116 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 MIR4781-201ENST00000585250 76 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 AL133255.1-201ENST00000606374 441 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 AC069294.1-201ENST00000608397 350 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 HMGB1P24-202ENST00000615653 685 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 MIR6132-201ENST00000622083 109 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 SNORA43.4-201ENST00000629559 138 ntBASIC2.29□□□□□ -2.04
RTP3Q9BQQ7 WWP1P1-201ENST00000466609 2769 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 RNU6-655P-201ENST00000362858 107 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 SNORD50.1-201ENST00000362987 71 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 RNU1-17P-201ENST00000363022 152 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 Y_RNA.813-201ENST00000364639 102 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 RNU6-596P-201ENST00000365395 98 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 Y_RNA.460-201ENST00000384255 102 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 RNU6-784P-201ENST00000384330 106 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 RNU6-220P-201ENST00000390919 107 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 Y_RNA.579-201ENST00000390939 94 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 AF228730.4-201ENST00000421457 183 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 AL139109.1-201ENST00000455491 297 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 AC140059.1-201ENST00000489238 361 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 HMGN1P13-201ENST00000505795 138 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 AC097473.1-201ENST00000508142 408 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 AC115990.1-201ENST00000526957 301 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 MIR5571-201ENST00000577998 113 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 AC105245.1-201ENST00000581934 244 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 MIR4658-201ENST00000584344 65 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 RPL30P11-203ENST00000598995 310 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 AL450472.1-202ENST00000637286 180 ntBASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RTP3Q9BQQ7 AP000560.1-201ENST00000624150 1937 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 RNU6-1210P-201ENST00000363775 107 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 Y_RNA.431-201ENST00000384086 102 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 RNU1-52P-201ENST00000384190 164 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 Y_RNA.504-201ENST00000384481 104 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 CBX3P9-201ENST00000402326 552 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 AL591034.2-201ENST00000402839 359 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 RNU2-2P-201ENST00000410396 191 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 RPS20P15-201ENST00000412792 311 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 USMG5P1-201ENST00000425964 177 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 MTND4P28-201ENST00000426217 387 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 AC011753.1-201ENST00000451001 220 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 AC104564.1-201ENST00000493028 407 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 AC016632.1-201ENST00000503994 196 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 AC005741.1-201ENST00000511094 432 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 SCARNA16.2-201ENST00000516520 172 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 MRPS36P4-201ENST00000534436 298 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 U2.15-201ENST00000611544 191 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 U2.16-201ENST00000613119 191 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 U2.12-201ENST00000613778 191 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 U2.20-201ENST00000613956 192 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 U2.9-201ENST00000615427 191 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms