Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 Y_RNA.5-201ENST00000362334 102 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 Y_RNA.31-201ENST00000362574 102 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 Y_RNA.112-201ENST00000363250 102 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 Y_RNA.216-201ENST00000364205 93 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 RNU6-622P-201ENST00000384272 103 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 MIR521-1-201ENST00000384902 87 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 RNA5SP390-201ENST00000410191 113 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.2□□□□□ -2.06
PKP2Q99959 AC074117.2-201ENST00000417130 397 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 AC243428.1-201ENST00000421099 264 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 PMCHL1-202ENST00000423102 261 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.2□□□□□ -2.06
PKP2Q99959 RPS3P1-201ENST00000456781 192 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 RPS29P27-201ENST00000463711 170 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.2□□□□□ -2.06
PKP2Q99959 RPL23AP49-201ENST00000492925 468 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.2□□□□□ -2.06
PKP2Q99959 ACA59.1-201ENST00000515966 143 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 Y_RNA.673-201ENST00000516306 88 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 Y_RNA.711-201ENST00000516993 102 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 SNORA31.23-201ENST00000517219 133 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 RNU6-586P-201ENST00000517265 104 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 AC005899.2-201ENST00000584353 90 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 AC078795.3-201ENST00000602913 472 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 MIR8076-201ENST00000611401 83 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 AC097372.5-201ENST00000623665 376 ntBASIC2.2□□□□□ -2.06
PKP2Q99959 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PKP2Q99959 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.2□□□□□ -2.06
PKP2Q99959 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.19□□□□□ -2.06
PKP2Q99959 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.19□□□□□ -2.06
PKP2Q99959 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PKP2Q99959 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
PKP2Q99959 RNU6-527P-201ENST00000363425 104 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 SNORD114-30-201ENST00000364448 72 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 SNORA25B-201ENST00000365507 128 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 Y_RNA.463-201ENST00000384271 102 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PKP2Q99959 AL591034.2-201ENST00000402839 359 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 AL355497.1-201ENST00000406262 551 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 HMGB3P2-201ENST00000411913 584 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 MTND3P9-201ENST00000429526 346 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PKP2Q99959 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.19□□□□□ -2.06
PKP2Q99959 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.19□□□□□ -2.06
PKP2Q99959 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.19□□□□□ -2.06
PKP2Q99959 FO393415.2-201ENST00000480085 343 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 AP001025.1-201ENST00000486139 332 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 AC114801.2-201ENST00000503825 781 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 SNORA4.4-201ENST00000515921 135 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 RNU6-470P-201ENST00000515954 104 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 RNU6-120P-201ENST00000516077 103 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 RNU6-976P-201ENST00000516086 111 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 RNU6-307P-201ENST00000516743 106 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 SNORA31.25-201ENST00000517242 134 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.19□□□□□ -2.06
PKP2Q99959 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.19□□□□□ -2.06
PKP2Q99959 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.19□□□□□ -2.06
PKP2Q99959 MIR5694-201ENST00000581190 76 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 AC090897.2-201ENST00000581715 130 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 BNIP3P16-201ENST00000589779 534 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 U4.3-201ENST00000621047 82 ntBASIC2.19□□□□□ -2.06
PKP2Q99959 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
PKP2Q99959 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.18□□□□□ -2.06
PKP2Q99959 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
PKP2Q99959 Y_RNA.48-201ENST00000362710 103 ntBASIC2.18□□□□□ -2.06
PKP2Q99959 RNU6-655P-201ENST00000362858 107 ntBASIC2.18□□□□□ -2.06
PKP2Q99959 RNU6-227P-201ENST00000362865 103 ntBASIC2.18□□□□□ -2.06
PKP2Q99959 MIR27B-201ENST00000385129 97 ntBASIC2.18□□□□□ -2.06
PKP2Q99959 RNU6-308P-201ENST00000390957 107 ntBASIC2.18□□□□□ -2.06
PKP2Q99959 RNA5SP247-201ENST00000411181 105 ntBASIC2.18□□□□□ -2.06
PKP2Q99959 AC018865.2-201ENST00000423631 129 ntBASIC2.18□□□□□ -2.06
PKP2Q99959 AL591043.1-201ENST00000432461 424 ntBASIC2.18□□□□□ -2.06
PKP2Q99959 AC243964.1-201ENST00000441814 261 ntBASIC2.18□□□□□ -2.06
PKP2Q99959 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.18□□□□□ -2.06
PKP2Q99959 snoU13.15-201ENST00000459407 104 ntBASIC2.18□□□□□ -2.06
PKP2Q99959 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.18□□□□□ -2.06
PKP2Q99959 AL163540.1-201ENST00000485382 386 ntBASIC2.18□□□□□ -2.06
PKP2Q99959 AC079804.2-201ENST00000490376 200 ntBASIC2.18□□□□□ -2.06
PKP2Q99959 AC022447.4-201ENST00000504053 364 ntBASIC2.18□□□□□ -2.06
PKP2Q99959 AC022493.2-201ENST00000506122 481 ntBASIC2.18□□□□□ -2.06
PKP2Q99959 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.18□□□□□ -2.06
PKP2Q99959 CBX3P8-201ENST00000532412 525 ntBASIC2.18□□□□□ -2.06
PKP2Q99959 MIR4273-201ENST00000582824 84 ntBASIC2.18□□□□□ -2.06
PKP2Q99959 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PKP2Q99959 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.18□□□□□ -2.06
PKP2Q99959 AL670379.2-201ENST00000604983 252 ntBASIC2.18□□□□□ -2.06
PKP2Q99959 MIR6817-201ENST00000615588 66 ntBASIC2.18□□□□□ -2.06
PKP2Q99959 AC090517.3-201ENST00000625170 141 ntBASIC2.18□□□□□ -2.06
PKP2Q99959 AC241585.2-209ENST00000638217 143 ntBASIC2.18□□□□□ -2.06
PKP2Q99959 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PKP2Q99959 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PKP2Q99959 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PKP2Q99959 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
PKP2Q99959 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PKP2Q99959 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PKP2Q99959 Y_RNA.28-201ENST00000362554 111 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 RNU6-490P-201ENST00000362985 107 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 RNU6-529P-201ENST00000363383 104 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 Y_RNA.238-201ENST00000364441 102 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms