Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MIR4325-201ENST00000583049 90 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 AC020895.1-201ENST00000595362 272 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 RMST_6.1-201ENST00000611980 203 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 AC006111.3-201ENST00000622137 383 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 SNORA43.4-201ENST00000629559 138 ntBASIC3.31□□□□□ -1.88
CDK5RAP1Q96SZ6 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU4-80P-201ENST00000363200 141 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 Z98749.2-208ENST00000381646 500 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU6-211P-201ENST00000384047 107 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 Y_RNA.435-201ENST00000384095 112 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU6-281P-201ENST00000384212 103 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 U8.10-201ENST00000384260 133 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 Y_RNA.488-201ENST00000384403 102 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 SNORD15B-201ENST00000384714 146 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 MIR329-1-201ENST00000385028 80 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU2-2P-201ENST00000410396 191 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 RNA5SP31-201ENST00000411144 127 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 SEPT7P4-201ENST00000437076 306 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 AC115115.1-201ENST00000449927 248 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 RPS20P22-201ENST00000473700 357 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 RN7SKP49-201ENST00000516675 260 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 RNA5SP380-201ENST00000517190 98 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 AL133393.1-201ENST00000603277 287 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU2-4P-201ENST00000606190 192 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 U2.15-201ENST00000611544 191 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 U2.16-201ENST00000613119 191 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 U2.12-201ENST00000613778 191 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 U2.9-201ENST00000615427 191 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 U2.11-201ENST00000616345 191 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 U2.2-201ENST00000616535 191 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 U2.3-201ENST00000617785 191 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 U2.19-201ENST00000618602 191 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU2-1-201ENST00000618664 191 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 U2.6-201ENST00000619225 191 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 U2.5-201ENST00000619465 191 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 U2.10-201ENST00000620268 191 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 U6.99-201ENST00000637524 83 ntBASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.3□□□□□ -1.88
CDK5RAP1Q96SZ6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 RNA5SP374-201ENST00000362939 125 ntBASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 Y_RNA.136-201ENST00000363444 102 ntBASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 Y_RNA.215-201ENST00000364204 112 ntBASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 Y_RNA.262-201ENST00000364641 102 ntBASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU1-140P-201ENST00000365040 165 ntBASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 Y_RNA.343-201ENST00000365354 112 ntBASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 Y_RNA.400-201ENST00000383963 111 ntBASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 Y_RNA.412-201ENST00000384001 104 ntBASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU6-541P-201ENST00000384709 110 ntBASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 MIR153-2-201ENST00000385225 87 ntBASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 Y_RNA.580-201ENST00000391004 95 ntBASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 snoU13.6-201ENST00000458785 104 ntBASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 SNORA40.9-201ENST00000515895 93 ntBASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 SNORA31.8-201ENST00000516327 108 ntBASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 SNORA43.2-201ENST00000516652 128 ntBASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 AC068657.1-201ENST00000520807 306 ntBASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 CYCSP39-201ENST00000565821 309 ntBASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 AL008718.3-201ENST00000610217 321 ntBASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CDK5RAP1Q96SZ6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 SNORD115-32-201ENST00000364079 82 ntBASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 Y_RNA.319-201ENST00000365138 92 ntBASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 RNU6-898P-201ENST00000365627 104 ntBASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 SNORA20-201ENST00000384662 132 ntBASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 Y_RNA.571-201ENST00000384753 98 ntBASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 AC098614.2-201ENST00000426040 255 ntBASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 AC009969.1-201ENST00000438726 172 ntBASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 AC010095.1-201ENST00000443543 144 ntBASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 AC114982.1-201ENST00000469402 321 ntBASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 AC006445.1-201ENST00000491925 405 ntBASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 SNORA31.1-201ENST00000515993 133 ntBASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 SNORA31.5-201ENST00000516190 133 ntBASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 AC107294.3-201ENST00000609211 526 ntBASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 AC002076.2-201ENST00000617362 122 ntBASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.28□□□□□ -1.88
CDK5RAP1Q96SZ6 AC092435.3-201ENST00000565538 3654 ntBASIC3.28□□□□□ -1.89
CDK5RAP1Q96SZ6 ZNF204P-201ENST00000416749 2397 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms