Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.3□□□□□ -2.36
LYSMD1Q96S90 MIR3118-1-201ENST00000581787 76 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 Z83818.1-201ENST00000603584 150 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 AL158042.1-201ENST00000605338 460 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 AC012557.2-201ENST00000605919 418 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 AC080013.3-201ENST00000606839 578 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 AC007742.2-201ENST00000618226 398 ntBASIC0.3□□□□□ -2.36
LYSMD1Q96S90 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.3□□□□□ -2.36
LYSMD1Q96S90 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.3□□□□□ -2.36
LYSMD1Q96S90 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
LYSMD1Q96S90 RNU6-428P-201ENST00000362942 107 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 Y_RNA.393-201ENST00000383936 102 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 RNU6-505P-201ENST00000384427 107 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 RNA5SP323-201ENST00000391094 133 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 MIR208B-201ENST00000401172 77 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.29□□□□□ -2.36
LYSMD1Q96S90 AC007283.2-201ENST00000424739 197 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 AC092423.1-201ENST00000430165 186 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 MTND1P32-201ENST00000433043 938 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 FABP5P4-201ENST00000437203 171 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 HMGN2P34-201ENST00000437647 269 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.29□□□□□ -2.36
LYSMD1Q96S90 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.29□□□□□ -2.36
LYSMD1Q96S90 AL133217.1-201ENST00000450980 425 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 AC113410.1-201ENST00000505029 247 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 AC092436.3-201ENST00000511788 257 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.29□□□□□ -2.36
LYSMD1Q96S90 RNU6-201P-201ENST00000517100 61 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 AC007834.2-201ENST00000536310 343 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 EIF4A1P12-201ENST00000551910 141 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.29□□□□□ -2.36
LYSMD1Q96S90 TMF1P1-201ENST00000576058 373 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 MIR5697-201ENST00000578045 78 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 AC080078.2-201ENST00000603766 501 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.29□□□□□ -2.36
LYSMD1Q96S90 MIR7111-201ENST00000619751 72 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 AL603839.4-201ENST00000624658 1005 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 Z69720.2-201ENST00000624755 279 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 AC019226.2-201ENST00000625973 424 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.29□□□□□ -2.36
LYSMD1Q96S90 BX322639.1-202ENST00000423987 2213 ntBASIC0.29□□□□□ -2.36
LYSMD1Q96S90 snoU2-30.2-201ENST00000362805 70 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 RNU6-552P-201ENST00000362869 119 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 U3.8-201ENST00000363675 217 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 RNU6-336P-201ENST00000364891 107 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 SNORA36A-201ENST00000384221 132 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 Y_RNA.504-201ENST00000384481 104 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 RNU6-417P-201ENST00000384712 107 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 RNU6-1031P-201ENST00000384773 107 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 RNU2-72P-201ENST00000411175 163 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
LYSMD1Q96S90 TIMM9P3-201ENST00000428659 274 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 AC016717.1-201ENST00000448918 286 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.28□□□□□ -2.36
LYSMD1Q96S90 AC007547.1-201ENST00000462177 490 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.28□□□□□ -2.36
LYSMD1Q96S90 RPS26P48-201ENST00000491713 339 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 RNU6-1003P-201ENST00000517099 105 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.28□□□□□ -2.36
LYSMD1Q96S90 RN7SL793P-201ENST00000583259 296 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 AC008521.1-201ENST00000587471 187 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 Z98751.3-201ENST00000604447 521 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 AL139022.2-201ENST00000606934 443 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 AC116165.2-201ENST00000616705 206 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 AC009509.4-201ENST00000619202 509 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 AC006001.4-201ENST00000622243 395 ntBASIC0.28□□□□□ -2.36
LYSMD1Q96S90 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.28□□□□□ -2.36
LYSMD1Q96S90 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.28□□□□□ -2.36
LYSMD1Q96S90 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.28□□□□□ -2.37
LYSMD1Q96S90 RNU6-1335P-201ENST00000365426 107 ntBASIC0.27□□□□□ -2.37
LYSMD1Q96S90 AL355796.1-201ENST00000406706 323 ntBASIC0.27□□□□□ -2.37
LYSMD1Q96S90 RNU2-3P-201ENST00000410144 191 ntBASIC0.27□□□□□ -2.37
LYSMD1Q96S90 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.27□□□□□ -2.37
LYSMD1Q96S90 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.27□□□□□ -2.37
LYSMD1Q96S90 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.27□□□□□ -2.37
LYSMD1Q96S90 HSFY7P-201ENST00000432672 318 ntBASIC0.27□□□□□ -2.37
LYSMD1Q96S90 AC119618.1-201ENST00000434191 222 ntBASIC0.27□□□□□ -2.37
LYSMD1Q96S90 AC002486.1-201ENST00000435098 391 ntBASIC0.27□□□□□ -2.37
LYSMD1Q96S90 HSFY8P-201ENST00000437934 318 ntBASIC0.27□□□□□ -2.37
LYSMD1Q96S90 RPEP5-201ENST00000441137 268 ntBASIC0.27□□□□□ -2.37
LYSMD1Q96S90 AL606517.2-201ENST00000442855 241 ntBASIC0.27□□□□□ -2.37
LYSMD1Q96S90 SRRM1P2-201ENST00000464531 1192 ntBASIC0.27□□□□□ -2.37
LYSMD1Q96S90 AC092989.1-201ENST00000481235 277 ntBASIC0.27□□□□□ -2.37
LYSMD1Q96S90 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.27□□□□□ -2.37
LYSMD1Q96S90 RNU2-34P-201ENST00000516534 121 ntBASIC0.27□□□□□ -2.37
LYSMD1Q96S90 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.27□□□□□ -2.37
LYSMD1Q96S90 MIR4753-201ENST00000585119 83 ntBASIC0.27□□□□□ -2.37
LYSMD1Q96S90 AL021368.1-201ENST00000607490 540 ntBASIC0.27□□□□□ -2.37
LYSMD1Q96S90 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.27□□□□□ -2.37
LYSMD1Q96S90 MIR6516-201ENST00000630554 81 ntBASIC0.27□□□□□ -2.37
LYSMD1Q96S90 AC010487.4-201ENST00000637027 61 ntBASIC0.27□□□□□ -2.37
LYSMD1Q96S90 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
LYSMD1Q96S90 Y_RNA.540-201ENST00000384638 111 ntBASIC0.26□□□□□ -2.37
LYSMD1Q96S90 MIR613-201ENST00000385248 95 ntBASIC0.26□□□□□ -2.37
LYSMD1Q96S90 RNA5SP467-201ENST00000391274 118 ntBASIC0.26□□□□□ -2.37
LYSMD1Q96S90 RNA5SP511-201ENST00000410487 115 ntBASIC0.26□□□□□ -2.37
LYSMD1Q96S90 RNU2-39P-201ENST00000410604 198 ntBASIC0.26□□□□□ -2.37
LYSMD1Q96S90 RNU6-607P-201ENST00000411283 108 ntBASIC0.26□□□□□ -2.37
LYSMD1Q96S90 AC078809.1-201ENST00000427601 140 ntBASIC0.26□□□□□ -2.37
LYSMD1Q96S90 AL606662.1-201ENST00000445763 553 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms