Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AL160314.1-201ENST00000490836 438 ntBASIC-1.41□□□□□ -2.64
VPS13AQ96RL7 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-1.41□□□□□ -2.64
VPS13AQ96RL7 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.41□□□□□ -2.64
VPS13AQ96RL7 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-1.41□□□□□ -2.64
VPS13AQ96RL7 AC005562.2-201ENST00000618264 111 ntBASIC-1.41□□□□□ -2.64
VPS13AQ96RL7 AL596211.1-201ENST00000569873 2277 ntBASIC-1.41□□□□□ -2.64
VPS13AQ96RL7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.41□□□□□ -2.64
VPS13AQ96RL7 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.41□□□□□ -2.64
VPS13AQ96RL7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.41□□□□□ -2.64
VPS13AQ96RL7 5S_rRNA.11-201ENST00000618635 84 ntBASIC-1.41□□□□□ -2.64
VPS13AQ96RL7 RNU4-56P-201ENST00000364700 142 ntBASIC-1.42□□□□□ -2.64
VPS13AQ96RL7 U8.15-201ENST00000390947 134 ntBASIC-1.42□□□□□ -2.64
VPS13AQ96RL7 DNAJA1P2-201ENST00000421360 1197 ntBASIC-1.42□□□□□ -2.64
VPS13AQ96RL7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.42□□□□□ -2.64
VPS13AQ96RL7 AL441985.1-201ENST00000457727 251 ntBASIC-1.42□□□□□ -2.64
VPS13AQ96RL7 NDUFA4P2-201ENST00000489989 244 ntBASIC-1.42□□□□□ -2.64
VPS13AQ96RL7 POLR3GP2-201ENST00000588366 668 ntBASIC-1.42□□□□□ -2.64
VPS13AQ96RL7 RNU6-652P-201ENST00000365488 107 ntBASIC-1.42□□□□□ -2.64
VPS13AQ96RL7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-1.42□□□□□ -2.64
VPS13AQ96RL7 AP000763.2-201ENST00000540641 163 ntBASIC-1.42□□□□□ -2.64
VPS13AQ96RL7 AC008536.2-201ENST00000607284 349 ntBASIC-1.42□□□□□ -2.64
VPS13AQ96RL7 AL360181.4-201ENST00000621752 134 ntBASIC-1.42□□□□□ -2.64
VPS13AQ96RL7 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.43□□□□□ -2.64
VPS13AQ96RL7 MT-TM-201ENST00000387377 68 ntBASIC-1.43□□□□□ -2.64
VPS13AQ96RL7 RNA5SP437-201ENST00000517249 129 ntBASIC-1.43□□□□□ -2.64
VPS13AQ96RL7 BNIP3P23-201ENST00000599655 511 ntBASIC-1.43□□□□□ -2.64
VPS13AQ96RL7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-1.43□□□□□ -2.64
VPS13AQ96RL7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-1.43□□□□□ -2.64
VPS13AQ96RL7 SUB1P2-201ENST00000556401 297 ntBASIC-1.43□□□□□ -2.64
VPS13AQ96RL7 AC011458.1-201ENST00000604034 617 ntBASIC-1.43□□□□□ -2.64
VPS13AQ96RL7 AC004241.3-201ENST00000611728 517 ntBASIC-1.43□□□□□ -2.64
VPS13AQ96RL7 FER-210ENST00000628534 558 ntTSL 5 BASIC-1.43□□□□□ -2.64
VPS13AQ96RL7 AC132825.6-201ENST00000638861 357 ntBASIC-1.43□□□□□ -2.64
VPS13AQ96RL7 SNORD83.1-201ENST00000411362 77 ntBASIC-1.43□□□□□ -2.64
VPS13AQ96RL7 ZNF204P-201ENST00000416749 2397 ntBASIC-1.43□□□□□ -2.64
VPS13AQ96RL7 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC-1.43□□□□□ -2.64
VPS13AQ96RL7 OR9P1P-201ENST00000496431 281 ntBASIC-1.43□□□□□ -2.64
VPS13AQ96RL7 HMGB1P33-201ENST00000563485 527 ntBASIC-1.43□□□□□ -2.64
VPS13AQ96RL7 MIR6502-201ENST00000617296 76 ntBASIC-1.43□□□□□ -2.64
VPS13AQ96RL7 AL356596.1-201ENST00000624230 379 ntBASIC-1.43□□□□□ -2.64
VPS13AQ96RL7 RNU6-447P-201ENST00000410293 104 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 RNU6-1118P-201ENST00000410382 104 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 RNU6-1076P-201ENST00000410397 104 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 RNU6-355P-201ENST00000410427 104 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 RNU6-791P-201ENST00000410467 104 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 RNU6-705P-201ENST00000410601 104 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 RNU6-1100P-201ENST00000410691 104 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 RNU6-860P-201ENST00000410860 104 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 RNU6-1217P-201ENST00000411276 104 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 RNU6-785P-201ENST00000411324 104 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 AL365184.2-201ENST00000431139 435 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 AL163973.1-201ENST00000484753 577 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 RNU6-667P-201ENST00000517186 102 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 AC006199.1-201ENST00000548728 219 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 U6.90-201ENST00000614007 104 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 U6.70-201ENST00000620287 104 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 RNU4-28P-201ENST00000364739 141 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 ZNF885P-201ENST00000420174 1098 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 AL355994.1-201ENST00000424379 260 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 MTCYBP10-201ENST00000424905 650 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 snoU13.13-201ENST00000458842 104 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 AL353803.5-201ENST00000599815 141 ntBASIC-1.44□□□□□ -2.64
VPS13AQ96RL7 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC-1.45□□□□□ -2.64
VPS13AQ96RL7 RNU6-1293P-201ENST00000384077 107 ntBASIC-1.45□□□□□ -2.64
VPS13AQ96RL7 AC016831.2-201ENST00000417179 352 ntBASIC-1.45□□□□□ -2.64
VPS13AQ96RL7 AL133217.1-201ENST00000450980 425 ntBASIC-1.45□□□□□ -2.64
VPS13AQ96RL7 RNU6-156P-201ENST00000621869 107 ntBASIC-1.45□□□□□ -2.64
VPS13AQ96RL7 RNU6-821P-201ENST00000390995 107 ntBASIC-1.45□□□□□ -2.64
VPS13AQ96RL7 RNU6-994P-201ENST00000410507 111 ntBASIC-1.45□□□□□ -2.64
VPS13AQ96RL7 AL606517.2-201ENST00000442855 241 ntBASIC-1.45□□□□□ -2.64
VPS13AQ96RL7 MTCYBP27-201ENST00000555160 670 ntBASIC-1.45□□□□□ -2.64
VPS13AQ96RL7 AC011979.2-201ENST00000527568 352 ntBASIC-1.45□□□□□ -2.64
VPS13AQ96RL7 MIR4520-1-201ENST00000582609 70 ntBASIC-1.45□□□□□ -2.64
VPS13AQ96RL7 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-1.45□□□□□ -2.64
VPS13AQ96RL7 RNU6-94P-201ENST00000607728 107 ntBASIC-1.45□□□□□ -2.64
VPS13AQ96RL7 AC135803.1-201ENST00000608748 565 ntBASIC-1.45□□□□□ -2.64
VPS13AQ96RL7 AC093726.3-201ENST00000637588 150 ntBASIC-1.46□□□□□ -2.64
VPS13AQ96RL7 AL158050.2-201ENST00000605336 568 ntBASIC-1.46□□□□□ -2.64
VPS13AQ96RL7 AL589743.7-201ENST00000612637 233 ntBASIC-1.46□□□□□ -2.64
VPS13AQ96RL7 SNORA75.1-201ENST00000391130 148 ntBASIC-1.47□□□□□ -2.64
VPS13AQ96RL7 AC091135.1-201ENST00000585943 307 ntBASIC-1.47□□□□□ -2.64
VPS13AQ96RL7 AL583856.2-201ENST00000606298 543 ntBASIC-1.47□□□□□ -2.64
VPS13AQ96RL7 SEPT14P17-201ENST00000617978 177 ntBASIC-1.47□□□□□ -2.64
VPS13AQ96RL7 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.47□□□□□ -2.64
VPS13AQ96RL7 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.47□□□□□ -2.64
VPS13AQ96RL7 SNORD18.1-201ENST00000363807 70 ntBASIC-1.47□□□□□ -2.64
VPS13AQ96RL7 EIF4E2P1-201ENST00000393781 255 ntBASIC-1.47□□□□□ -2.64
VPS13AQ96RL7 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.47□□□□□ -2.64
VPS13AQ96RL7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-1.47□□□□□ -2.64
VPS13AQ96RL7 AC109446.1-201ENST00000566172 220 ntBASIC-1.47□□□□□ -2.64
VPS13AQ96RL7 ANKRD26P2-201ENST00000445530 1710 ntBASIC-1.47□□□□□ -2.65
VPS13AQ96RL7 SNORA1-201ENST00000384107 130 ntBASIC-1.47□□□□□ -2.65
VPS13AQ96RL7 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.47□□□□□ -2.65
VPS13AQ96RL7 USP9YP16-201ENST00000430287 407 ntBASIC-1.47□□□□□ -2.65
VPS13AQ96RL7 SNORA13-201ENST00000458790 133 ntBASIC-1.47□□□□□ -2.65
VPS13AQ96RL7 AC131235.4-201ENST00000609288 620 ntBASIC-1.47□□□□□ -2.65
VPS13AQ96RL7 AL442067.1-201ENST00000613261 223 ntBASIC-1.47□□□□□ -2.65
VPS13AQ96RL7 AC010133.1-201ENST00000615809 842 ntBASIC-1.47□□□□□ -2.65
VPS13AQ96RL7 MIR1-1-201ENST00000362147 71 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms