Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 LINC01399-202ENST00000458450 244 ntBASIC-0.9□□□□□ -2.55
CFAP54Q96N23 OR9P1P-201ENST00000496431 281 ntBASIC-0.9□□□□□ -2.55
CFAP54Q96N23 MIR4709-201ENST00000577272 72 ntBASIC-0.9□□□□□ -2.55
CFAP54Q96N23 AC055764.2-201ENST00000610089 670 ntBASIC-0.9□□□□□ -2.55
CFAP54Q96N23 MIR101-2-201ENST00000362195 79 ntBASIC-0.9□□□□□ -2.55
CFAP54Q96N23 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.9□□□□□ -2.55
CFAP54Q96N23 RNU6-505P-201ENST00000384427 107 ntBASIC-0.9□□□□□ -2.55
CFAP54Q96N23 MTCYBP10-201ENST00000424905 650 ntBASIC-0.9□□□□□ -2.55
CFAP54Q96N23 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC-0.9□□□□□ -2.55
CFAP54Q96N23 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.9□□□□□ -2.55
CFAP54Q96N23 AC104695.3-201ENST00000604052 296 ntBASIC-0.9□□□□□ -2.55
CFAP54Q96N23 AC131159.1-201ENST00000621854 213 ntBASIC-0.9□□□□□ -2.55
CFAP54Q96N23 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.9□□□□□ -2.55
CFAP54Q96N23 AC017037.3-201ENST00000625016 472 ntBASIC-0.9□□□□□ -2.55
CFAP54Q96N23 RNU2-48P-201ENST00000410694 191 ntBASIC-0.9□□□□□ -2.55
CFAP54Q96N23 RNU6-943P-201ENST00000516960 98 ntBASIC-0.9□□□□□ -2.55
CFAP54Q96N23 MIR148A-201ENST00000362215 68 ntBASIC-0.91□□□□□ -2.55
CFAP54Q96N23 RNU1-76P-201ENST00000362903 159 ntBASIC-0.91□□□□□ -2.55
CFAP54Q96N23 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.91□□□□□ -2.55
CFAP54Q96N23 SNORA26-201ENST00000391286 122 ntBASIC-0.91□□□□□ -2.55
CFAP54Q96N23 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.91□□□□□ -2.55
CFAP54Q96N23 RPL30P15-201ENST00000457129 321 ntBASIC-0.91□□□□□ -2.55
CFAP54Q96N23 AP002371.1-201ENST00000463604 433 ntBASIC-0.91□□□□□ -2.55
CFAP54Q96N23 AL160314.1-201ENST00000490836 438 ntBASIC-0.91□□□□□ -2.55
CFAP54Q96N23 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.91□□□□□ -2.55
CFAP54Q96N23 MIR5695-201ENST00000579717 85 ntBASIC-0.91□□□□□ -2.55
CFAP54Q96N23 AC016597.2-201ENST00000613256 341 ntBASIC-0.91□□□□□ -2.55
CFAP54Q96N23 uc_338.19-201ENST00000616808 99 ntBASIC-0.91□□□□□ -2.55
CFAP54Q96N23 MIR335-201ENST00000362173 94 ntBASIC-0.91□□□□□ -2.56
CFAP54Q96N23 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.91□□□□□ -2.56
CFAP54Q96N23 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.91□□□□□ -2.56
CFAP54Q96N23 MTCO1P5-201ENST00000433573 344 ntBASIC-0.91□□□□□ -2.56
CFAP54Q96N23 AC097473.1-201ENST00000508142 408 ntBASIC-0.91□□□□□ -2.56
CFAP54Q96N23 MIR4770-201ENST00000579149 58 ntBASIC-0.91□□□□□ -2.56
CFAP54Q96N23 MIR3976-201ENST00000606807 139 ntBASIC-0.91□□□□□ -2.56
CFAP54Q96N23 AC009318.4-201ENST00000620496 486 ntBASIC-0.91□□□□□ -2.56
CFAP54Q96N23 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.91□□□□□ -2.56
CFAP54Q96N23 AC106754.1-201ENST00000562632 1513 ntBASIC-0.92□□□□□ -2.56
CFAP54Q96N23 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.92□□□□□ -2.56
CFAP54Q96N23 RNA5SP323-201ENST00000391094 133 ntBASIC-0.92□□□□□ -2.56
CFAP54Q96N23 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.92□□□□□ -2.56
CFAP54Q96N23 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC-0.92□□□□□ -2.56
CFAP54Q96N23 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC-0.92□□□□□ -2.56
CFAP54Q96N23 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.92□□□□□ -2.56
CFAP54Q96N23 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.92□□□□□ -2.56
CFAP54Q96N23 AC027419.1-201ENST00000522976 328 ntBASIC-0.92□□□□□ -2.56
CFAP54Q96N23 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC-0.92□□□□□ -2.56
CFAP54Q96N23 AC080188.3-201ENST00000624842 748 ntBASIC-0.92□□□□□ -2.56
CFAP54Q96N23 SNORA75.1-201ENST00000391130 148 ntBASIC-0.92□□□□□ -2.56
CFAP54Q96N23 AL663109.1-201ENST00000411498 844 ntBASIC-0.92□□□□□ -2.56
CFAP54Q96N23 IL7-206ENST00000520269 456 ntTSL 3 BASIC-0.92□□□□□ -2.56
CFAP54Q96N23 RNA5SP493-201ENST00000364115 91 ntBASIC-0.92□□□□□ -2.56
CFAP54Q96N23 RNU6-47P-201ENST00000383866 107 ntBASIC-0.92□□□□□ -2.56
CFAP54Q96N23 RNU6-217P-201ENST00000384164 104 ntBASIC-0.92□□□□□ -2.56
CFAP54Q96N23 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.92□□□□□ -2.56
CFAP54Q96N23 RPL36AP48-201ENST00000485521 314 ntBASIC-0.92□□□□□ -2.56
CFAP54Q96N23 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC-0.92□□□□□ -2.56
CFAP54Q96N23 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.92□□□□□ -2.56
CFAP54Q96N23 MT-TC-201ENST00000387405 66 ntBASIC-0.93□□□□□ -2.56
CFAP54Q96N23 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.93□□□□□ -2.56
CFAP54Q96N23 AC005042.3-201ENST00000453230 174 ntBASIC-0.93□□□□□ -2.56
CFAP54Q96N23 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.93□□□□□ -2.56
CFAP54Q96N23 RNU6-331P-201ENST00000384724 107 ntBASIC-0.93□□□□□ -2.56
CFAP54Q96N23 AL133475.1-201ENST00000404414 305 ntBASIC-0.93□□□□□ -2.56
CFAP54Q96N23 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.93□□□□□ -2.56
CFAP54Q96N23 AC007327.1-201ENST00000447461 264 ntBASIC-0.93□□□□□ -2.56
CFAP54Q96N23 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.93□□□□□ -2.56
CFAP54Q96N23 AC010424.1-201ENST00000506336 297 ntBASIC-0.93□□□□□ -2.56
CFAP54Q96N23 PTP4A1P4-201ENST00000512479 322 ntBASIC-0.93□□□□□ -2.56
CFAP54Q96N23 AC093249.1-201ENST00000567049 203 ntBASIC-0.93□□□□□ -2.56
CFAP54Q96N23 AL391840.1-201ENST00000571144 367 ntBASIC-0.93□□□□□ -2.56
CFAP54Q96N23 AC018926.1-201ENST00000616335 435 ntBASIC-0.93□□□□□ -2.56
CFAP54Q96N23 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC-0.94□□□□□ -2.56
CFAP54Q96N23 MIR1298-201ENST00000408783 112 ntBASIC-0.94□□□□□ -2.56
CFAP54Q96N23 RNA5SP163-201ENST00000410304 99 ntBASIC-0.94□□□□□ -2.56
CFAP54Q96N23 AC010385.1-201ENST00000412374 256 ntBASIC-0.94□□□□□ -2.56
CFAP54Q96N23 MTND4P15-201ENST00000437913 1033 ntBASIC-0.94□□□□□ -2.56
CFAP54Q96N23 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.94□□□□□ -2.56
CFAP54Q96N23 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.94□□□□□ -2.56
CFAP54Q96N23 RNU6-947P-201ENST00000516264 106 ntBASIC-0.94□□□□□ -2.56
CFAP54Q96N23 RNA5SP481-201ENST00000516814 122 ntBASIC-0.94□□□□□ -2.56
CFAP54Q96N23 AC026421.1-201ENST00000519101 163 ntBASIC-0.94□□□□□ -2.56
CFAP54Q96N23 AC068790.2-201ENST00000602601 557 ntBASIC-0.94□□□□□ -2.56
CFAP54Q96N23 AC098483.2-201ENST00000603158 454 ntBASIC-0.94□□□□□ -2.56
CFAP54Q96N23 AC080078.2-201ENST00000603766 501 ntBASIC-0.94□□□□□ -2.56
CFAP54Q96N23 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.94□□□□□ -2.56
CFAP54Q96N23 RNU6-1019P-201ENST00000364424 107 ntBASIC-0.94□□□□□ -2.56
CFAP54Q96N23 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.94□□□□□ -2.56
CFAP54Q96N23 RNU6-540P-201ENST00000384622 101 ntBASIC-0.94□□□□□ -2.56
CFAP54Q96N23 MIR563-201ENST00000385080 79 ntBASIC-0.94□□□□□ -2.56
CFAP54Q96N23 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.94□□□□□ -2.56
CFAP54Q96N23 RNU6-586P-201ENST00000517265 104 ntBASIC-0.94□□□□□ -2.56
CFAP54Q96N23 DEFB130C-202ENST00000530001 230 ntBASIC-0.94□□□□□ -2.56
CFAP54Q96N23 AL590491.3-201ENST00000610731 82 ntBASIC-0.94□□□□□ -2.56
CFAP54Q96N23 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-0.95□□□□□ -2.56
CFAP54Q96N23 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.95□□□□□ -2.56
CFAP54Q96N23 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.95□□□□□ -2.56
CFAP54Q96N23 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.95□□□□□ -2.56
CFAP54Q96N23 ELOCP9-201ENST00000418624 239 ntBASIC-0.95□□□□□ -2.56
CFAP54Q96N23 DEFB130D-201ENST00000426866 237 ntBASIC-0.95□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms