Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AC130509.1-201ENST00000464158 433 ntBASIC1.75□□□□□ -2.13
ZNF560Q96MR9 AC019235.1-201ENST00000503847 207 ntBASIC1.75□□□□□ -2.13
ZNF560Q96MR9 AC092436.3-201ENST00000511788 257 ntBASIC1.75□□□□□ -2.13
ZNF560Q96MR9 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.75□□□□□ -2.13
ZNF560Q96MR9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.75□□□□□ -2.13
ZNF560Q96MR9 RNU6-89P-201ENST00000606519 100 ntBASIC1.75□□□□□ -2.13
ZNF560Q96MR9 AC004492.1-201ENST00000607036 742 ntBASIC1.75□□□□□ -2.13
ZNF560Q96MR9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.75□□□□□ -2.13
ZNF560Q96MR9 AC022513.1-201ENST00000624512 117 ntBASIC1.75□□□□□ -2.13
ZNF560Q96MR9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.75□□□□□ -2.13
ZNF560Q96MR9 AC068137.3-201ENST00000639191 341 ntBASIC1.75□□□□□ -2.13
ZNF560Q96MR9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.75□□□□□ -2.13
ZNF560Q96MR9 AC006026.1-201ENST00000444025 1803 ntBASIC1.75□□□□□ -2.13
ZNF560Q96MR9 RNU6-562P-201ENST00000362731 107 ntBASIC1.74□□□□□ -2.13
ZNF560Q96MR9 RNU5B-2P-201ENST00000363036 113 ntBASIC1.74□□□□□ -2.13
ZNF560Q96MR9 SNORA29-201ENST00000384183 140 ntBASIC1.74□□□□□ -2.13
ZNF560Q96MR9 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.74□□□□□ -2.13
ZNF560Q96MR9 NCOR1P3-201ENST00000420479 303 ntBASIC1.74□□□□□ -2.13
ZNF560Q96MR9 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.74□□□□□ -2.13
ZNF560Q96MR9 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.74□□□□□ -2.13
ZNF560Q96MR9 MTCO3P46-201ENST00000425787 232 ntBASIC1.74□□□□□ -2.13
ZNF560Q96MR9 MTND3P9-201ENST00000429526 346 ntBASIC1.74□□□□□ -2.13
ZNF560Q96MR9 SEPT14P3-201ENST00000439401 183 ntBASIC1.74□□□□□ -2.13
ZNF560Q96MR9 MTND1P1-201ENST00000445453 368 ntBASIC1.74□□□□□ -2.13
ZNF560Q96MR9 AL732372.2-207ENST00000445840 183 ntBASIC1.74□□□□□ -2.13
ZNF560Q96MR9 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ZNF560Q96MR9 AC007395.1-201ENST00000451333 677 ntBASIC1.74□□□□□ -2.13
ZNF560Q96MR9 SEPT14P2-201ENST00000453405 183 ntBASIC1.74□□□□□ -2.13
ZNF560Q96MR9 SEPT14P4-201ENST00000513445 186 ntBASIC1.74□□□□□ -2.13
ZNF560Q96MR9 FO082796.1-201ENST00000523795 183 ntBASIC1.74□□□□□ -2.13
ZNF560Q96MR9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.74□□□□□ -2.13
ZNF560Q96MR9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.74□□□□□ -2.13
ZNF560Q96MR9 CPDP1-201ENST00000579660 283 ntBASIC1.74□□□□□ -2.13
ZNF560Q96MR9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.74□□□□□ -2.13
ZNF560Q96MR9 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.74□□□□□ -2.13
ZNF560Q96MR9 AC048344.4-201ENST00000619744 527 ntBASIC1.74□□□□□ -2.13
ZNF560Q96MR9 RNU6-522P-201ENST00000364497 107 ntBASIC1.73□□□□□ -2.13
ZNF560Q96MR9 RNU4-42P-201ENST00000364738 142 ntBASIC1.73□□□□□ -2.13
ZNF560Q96MR9 RNU6-1286P-201ENST00000383871 107 ntBASIC1.73□□□□□ -2.13
ZNF560Q96MR9 RNU6-1026P-201ENST00000384465 108 ntBASIC1.73□□□□□ -2.13
ZNF560Q96MR9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
ZNF560Q96MR9 RPS26P42-201ENST00000413485 326 ntBASIC1.73□□□□□ -2.13
ZNF560Q96MR9 VN1R36P-201ENST00000414936 291 ntBASIC1.73□□□□□ -2.13
ZNF560Q96MR9 MTCO1P20-201ENST00000425366 358 ntBASIC1.73□□□□□ -2.13
ZNF560Q96MR9 MRPS10P2-201ENST00000431226 381 ntBASIC1.73□□□□□ -2.13
ZNF560Q96MR9 ERLEC1P1-201ENST00000433806 578 ntBASIC1.73□□□□□ -2.13
ZNF560Q96MR9 MTCO1P44-201ENST00000441935 243 ntBASIC1.73□□□□□ -2.13
ZNF560Q96MR9 MTND2P22-201ENST00000444325 1033 ntBASIC1.73□□□□□ -2.13
ZNF560Q96MR9 AC112492.4-201ENST00000456549 352 ntBASIC1.73□□□□□ -2.13
ZNF560Q96MR9 AMD1P1-201ENST00000457220 922 ntBASIC1.73□□□□□ -2.13
ZNF560Q96MR9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.73□□□□□ -2.13
ZNF560Q96MR9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.73□□□□□ -2.13
ZNF560Q96MR9 AC008834.1-201ENST00000511612 175 ntBASIC1.73□□□□□ -2.13
ZNF560Q96MR9 SNORA44.1-201ENST00000517031 108 ntBASIC1.73□□□□□ -2.13
ZNF560Q96MR9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.73□□□□□ -2.13
ZNF560Q96MR9 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.73□□□□□ -2.13
ZNF560Q96MR9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.73□□□□□ -2.13
ZNF560Q96MR9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.73□□□□□ -2.13
ZNF560Q96MR9 FGF7P1-201ENST00000582820 288 ntBASIC1.73□□□□□ -2.13
ZNF560Q96MR9 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.73□□□□□ -2.13
ZNF560Q96MR9 AL162413.1-201ENST00000603198 110 ntBASIC1.73□□□□□ -2.13
ZNF560Q96MR9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.73□□□□□ -2.13
ZNF560Q96MR9 FER-210ENST00000628534 558 ntTSL 5 BASIC1.73□□□□□ -2.13
ZNF560Q96MR9 OR4G1P-203ENST00000641984 1631 ntBASIC1.73□□□□□ -2.13
ZNF560Q96MR9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
ZNF560Q96MR9 RNA5SP432-201ENST00000362480 116 ntBASIC1.72□□□□□ -2.13
ZNF560Q96MR9 Y_RNA.194-201ENST00000363985 102 ntBASIC1.72□□□□□ -2.13
ZNF560Q96MR9 RNA5SP213-201ENST00000391031 106 ntBASIC1.72□□□□□ -2.13
ZNF560Q96MR9 RNU6-1068P-201ENST00000410958 103 ntBASIC1.72□□□□□ -2.13
ZNF560Q96MR9 SNRPEP10-201ENST00000420249 274 ntBASIC1.72□□□□□ -2.13
ZNF560Q96MR9 MTCO1P29-201ENST00000496868 288 ntBASIC1.72□□□□□ -2.13
ZNF560Q96MR9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.72□□□□□ -2.13
ZNF560Q96MR9 HMGB1P33-201ENST00000563485 527 ntBASIC1.72□□□□□ -2.13
ZNF560Q96MR9 AC010928.2-201ENST00000588017 287 ntBASIC1.72□□□□□ -2.13
ZNF560Q96MR9 BX248123.2-201ENST00000606318 124 ntBASIC1.72□□□□□ -2.13
ZNF560Q96MR9 DISC2.1-201ENST00000612827 205 ntBASIC1.72□□□□□ -2.13
ZNF560Q96MR9 FAM157A-202ENST00000615155 405 ntBASIC1.72□□□□□ -2.13
ZNF560Q96MR9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.72□□□□□ -2.13
ZNF560Q96MR9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.71□□□□□ -2.14
ZNF560Q96MR9 RNU6-661P-201ENST00000362409 107 ntBASIC1.71□□□□□ -2.14
ZNF560Q96MR9 Y_RNA.559-201ENST00000384686 107 ntBASIC1.71□□□□□ -2.14
ZNF560Q96MR9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
ZNF560Q96MR9 MIR450B-201ENST00000401182 78 ntBASIC1.71□□□□□ -2.14
ZNF560Q96MR9 RNU6-325P-201ENST00000411132 105 ntBASIC1.71□□□□□ -2.14
ZNF560Q96MR9 RPS20P15-201ENST00000412792 311 ntBASIC1.71□□□□□ -2.14
ZNF560Q96MR9 MTCO1P21-201ENST00000416634 589 ntBASIC1.71□□□□□ -2.14
ZNF560Q96MR9 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.71□□□□□ -2.14
ZNF560Q96MR9 HSPE1P21-201ENST00000438283 308 ntBASIC1.71□□□□□ -2.14
ZNF560Q96MR9 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.71□□□□□ -2.14
ZNF560Q96MR9 snoU13.6-201ENST00000458785 104 ntBASIC1.71□□□□□ -2.14
ZNF560Q96MR9 AC097473.1-201ENST00000508142 408 ntBASIC1.71□□□□□ -2.14
ZNF560Q96MR9 RNU6-1281P-201ENST00000516223 105 ntBASIC1.71□□□□□ -2.14
ZNF560Q96MR9 SUMO2P18-201ENST00000518873 252 ntBASIC1.71□□□□□ -2.14
ZNF560Q96MR9 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.71□□□□□ -2.14
ZNF560Q96MR9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.71□□□□□ -2.14
ZNF560Q96MR9 MIR3198-2-201ENST00000577868 80 ntBASIC1.71□□□□□ -2.14
ZNF560Q96MR9 SNORD53B-201ENST00000577887 78 ntBASIC1.71□□□□□ -2.14
ZNF560Q96MR9 MIR8076-201ENST00000611401 83 ntBASIC1.71□□□□□ -2.14
ZNF560Q96MR9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
ZNF560Q96MR9 Y_RNA.123-201ENST00000363338 102 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms