Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SCARNA4.1-201ENST00000628597 123 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.09□□□□□ -2.07
PDLIM5Q96HC4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.09□□□□□ -2.08
PDLIM5Q96HC4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 Y_RNA.813-201ENST00000364639 102 ntBASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 SNORD14D-201ENST00000384390 87 ntBASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 RNU6-1297P-201ENST00000384415 104 ntBASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 SNORA46.1-201ENST00000391069 153 ntBASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 SNORA75.4-201ENST00000391278 119 ntBASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 MIR1294-201ENST00000408503 142 ntBASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 RNU6-174P-201ENST00000410406 106 ntBASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 RNA5SP450-201ENST00000411206 102 ntBASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 AP000275.1-201ENST00000411943 390 ntBASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 AL353689.1-201ENST00000438895 199 ntBASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 AC090255.1-201ENST00000495779 349 ntBASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 RNU5F-2P-201ENST00000516066 82 ntBASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 RNU6-965P-201ENST00000516721 96 ntBASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 RNU6-1213P-201ENST00000517075 94 ntBASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 AP002770.2-201ENST00000543613 532 ntBASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 AC078795.3-201ENST00000602913 472 ntBASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 AL356157.2-201ENST00000605122 111 ntBASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 AC009229.3-201ENST00000608056 282 ntBASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
PDLIM5Q96HC4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 KPNA2P1-201ENST00000458289 1591 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 RNU4-82P-201ENST00000362443 140 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 RNA5SP276-201ENST00000362580 94 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 RNU6-227P-201ENST00000362865 103 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 SNORD50.1-201ENST00000362987 71 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 RNU6-1141P-201ENST00000364520 107 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 Y_RNA.259-201ENST00000364619 101 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 Y_RNA.419-201ENST00000384041 102 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 RNU6-301P-201ENST00000384277 107 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 RNU6-790P-201ENST00000384479 105 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 MIR634-201ENST00000385208 97 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 RNA5SP338-201ENST00000410495 85 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 RNU2-48P-201ENST00000410694 191 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 AL158823.1-201ENST00000418441 478 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 MTND3P9-201ENST00000429526 346 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 DAP3P1-201ENST00000441522 278 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 MTCO3P10-201ENST00000455912 772 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 RNU7-152P-201ENST00000458982 64 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 U8.21-201ENST00000459536 136 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 SNRPGP7-201ENST00000469016 106 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 Y_RNA.708-201ENST00000516950 96 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 MIR5690-201ENST00000583739 73 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 AC018889.1-201ENST00000605372 397 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 AC005296.1-201ENST00000616145 209 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 AC091932.3-201ENST00000624223 323 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 AP000560.1-201ENST00000624150 1937 ntBASIC2.07□□□□□ -2.08
PDLIM5Q96HC4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 Y_RNA.11-201ENST00000362375 109 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 RNU6-1285P-201ENST00000363480 105 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 RNU6-694P-201ENST00000364071 147 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 RNU6-743P-201ENST00000364151 106 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 RNU6-43P-201ENST00000384302 107 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 RNU6-310P-201ENST00000384655 107 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 RNU6-331P-201ENST00000384724 107 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 RNY4P36-201ENST00000391116 96 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 Y_RNA.646-201ENST00000410980 101 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 AC096920.1-201ENST00000423991 241 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 RPL23AP95-201ENST00000426806 265 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 MTND2P29-201ENST00000438595 412 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 AC025033.1-201ENST00000463883 194 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 RPL7P42-201ENST00000481005 679 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 AC132942.1-201ENST00000486753 483 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 AC097473.1-201ENST00000508142 408 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 AC091874.1-201ENST00000511402 339 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 MRPS17P9-201ENST00000511924 393 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 RNA5SP384-201ENST00000516615 116 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 MIR5696-201ENST00000578474 85 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 SNORD53-201ENST00000579969 78 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 AL133255.1-201ENST00000606374 441 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 AC084781.2-201ENST00000615568 161 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 U1.36-201ENST00000620684 176 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 AL669831.3-213ENST00000636676 183 ntBASIC2.06□□□□□ -2.08
PDLIM5Q96HC4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 RNU6-142P-201ENST00000384019 107 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 RNU6-784P-201ENST00000384330 106 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 RNU6-933P-201ENST00000384424 107 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 MIR521-1-201ENST00000384902 87 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms