Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 RNA5SP363-201ENST00000365072 115 ntBASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 Y_RNA.505-201ENST00000384489 102 ntBASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 SNORD115-47-201ENST00000391226 86 ntBASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 MIR548F1-201ENST00000408667 84 ntBASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 FCF1P9-201ENST00000412546 282 ntBASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 HMGN2P3-201ENST00000433603 273 ntBASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 HMGN2P5-201ENST00000436882 273 ntBASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 TOMM22P6-201ENST00000465035 409 ntBASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 MIR449C-201ENST00000516047 92 ntBASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 RNU6-1098P-201ENST00000516772 96 ntBASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 AC022254.1-201ENST00000567857 235 ntBASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 AC068790.6-201ENST00000602558 258 ntBASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 AC009318.2-201ENST00000610917 651 ntBASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 AL359697.1-201ENST00000624879 587 ntBASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 MIR3662-201ENST00000637030 95 ntBASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 SNORD115-32-201ENST00000364079 82 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 RNA5SP493-201ENST00000364115 91 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 RNU6-743P-201ENST00000364151 106 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 RNU6-831P-201ENST00000384548 107 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 SNORA48.1-201ENST00000390879 135 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 RNA5SP212-201ENST00000391223 107 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 RNA5SP494-201ENST00000410653 129 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 Z98742.3-201ENST00000418637 326 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 DPH3P2-201ENST00000422618 250 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 AL445646.1-201ENST00000431784 216 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 MTND1P4-201ENST00000435196 415 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 MTCO1P44-201ENST00000441935 243 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 RPL23AP6-201ENST00000446637 472 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 PCMTD1P1-201ENST00000455560 355 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 AC130509.1-201ENST00000464158 433 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 MTCO2P30-201ENST00000503662 364 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 DEFB131C-201ENST00000528817 165 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 MRPS36P4-201ENST00000534436 298 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 AC090517.1-201ENST00000569307 266 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 MIR4419B-201ENST00000577260 68 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 MIR3942-201ENST00000585264 109 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 AC005786.1-201ENST00000588553 154 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 AC018638.8-201ENST00000588755 281 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 AC146944.4-201ENST00000602697 718 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 CYP2C61P-201ENST00000604072 290 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 AL022345.1-201ENST00000607292 135 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 AL773524.1-201ENST00000614065 229 ntBASIC1.45□□□□□ -2.18
RPUSD4Q96CM3 MTND5P9-201ENST00000503854 1755 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 CBX3P1-201ENST00000325243 554 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 Y_RNA.151-201ENST00000363566 112 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 SNORD114-6-201ENST00000364393 72 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 RNU6-1013P-201ENST00000384180 107 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 MIR521-1-201ENST00000384902 87 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 RNU6-1093P-201ENST00000391194 107 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 MIR300-201ENST00000401138 83 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 RNA5SP508-201ENST00000411327 119 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 AC009310.1-201ENST00000414414 451 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 AC244636.1-201ENST00000421152 228 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 AL358453.1-201ENST00000422522 250 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 AL590632.1-201ENST00000424289 371 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 HSPE1P21-201ENST00000438283 308 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 MTND1P17-201ENST00000448961 204 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 RPL23AP75-201ENST00000491601 451 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 RPS23P5-201ENST00000495419 428 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 AC107393.1-201ENST00000512403 346 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 SNORA59B-202ENST00000578183 701 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 MIR5696-201ENST00000578474 85 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 MIR4435-1-201ENST00000582552 80 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 AC007014.2-201ENST00000615581 479 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 AC005562.2-201ENST00000618264 111 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 AC098679.4-201ENST00000624241 654 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms