Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNU7-4P-201ENST00000516961 62 ntBASIC3.09□□□□□ -1.91
CHMP4CQ96CF2 AC023824.2-201ENST00000566185 400 ntBASIC3.09□□□□□ -1.91
CHMP4CQ96CF2 MIR3670-2-201ENST00000582974 65 ntBASIC3.09□□□□□ -1.91
CHMP4CQ96CF2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.09□□□□□ -1.91
CHMP4CQ96CF2 MIR3670-1-201ENST00000584160 65 ntBASIC3.09□□□□□ -1.91
CHMP4CQ96CF2 MIR3670-3-201ENST00000584855 65 ntBASIC3.09□□□□□ -1.91
CHMP4CQ96CF2 AL355802.3-201ENST00000607571 545 ntBASIC3.09□□□□□ -1.91
CHMP4CQ96CF2 MIR3670-4-201ENST00000612260 65 ntBASIC3.09□□□□□ -1.91
CHMP4CQ96CF2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.09□□□□□ -1.91
CHMP4CQ96CF2 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 RNU4-82P-201ENST00000362443 140 ntBASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 RNU4-76P-201ENST00000364509 141 ntBASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 Y_RNA.314-201ENST00000365114 102 ntBASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 RNU1-138P-201ENST00000384093 164 ntBASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 RNU6-17P-201ENST00000384245 107 ntBASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 U8.10-201ENST00000384260 133 ntBASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 RNU6-18P-201ENST00000384527 107 ntBASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 SNORA12-201ENST00000391162 147 ntBASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 RPS12P2-201ENST00000439728 269 ntBASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 Y_RNA.639-201ENST00000458981 102 ntBASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 RNU7-87P-201ENST00000459343 62 ntBASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 Y_RNA.701-201ENST00000516812 110 ntBASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 SNORD116.3-201ENST00000517176 78 ntBASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 AL049779.4-201ENST00000604500 156 ntBASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 MIR6817-201ENST00000615588 66 ntBASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 AC243829.7-201ENST00000633081 225 ntBASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP4CQ96CF2 Z82209.1-201ENST00000422141 2135 ntBASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 RNA5SP68-201ENST00000363885 119 ntBASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 RNU6-694P-201ENST00000364071 147 ntBASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 RNA5SP126-201ENST00000365092 109 ntBASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 SNORD42.2-201ENST00000365570 69 ntBASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 XGY1-201ENST00000381172 446 ntBASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 Y_RNA.445-201ENST00000384168 102 ntBASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 MIR95-201ENST00000385072 81 ntBASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 MIR320B2-201ENST00000408479 138 ntBASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 MTND1P14-201ENST00000427400 950 ntBASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 CBX3P6-201ENST00000430257 527 ntBASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 AC105758.1-201ENST00000506038 399 ntBASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 RNA5SP54-201ENST00000516951 92 ntBASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 SNORA48.11-201ENST00000517015 89 ntBASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 AC090517.1-201ENST00000569307 266 ntBASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 MIR4513-201ENST00000581077 86 ntBASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 MIR3162-201ENST00000581818 82 ntBASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHMP4CQ96CF2 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.06□□□□□ -1.92
CHMP4CQ96CF2 RNU6-944P-201ENST00000364023 107 ntBASIC3.06□□□□□ -1.92
CHMP4CQ96CF2 Y_RNA.394-201ENST00000383942 103 ntBASIC3.06□□□□□ -1.92
CHMP4CQ96CF2 MIR1294-201ENST00000408503 142 ntBASIC3.06□□□□□ -1.92
CHMP4CQ96CF2 AC009963.1-201ENST00000417265 157 ntBASIC3.06□□□□□ -1.92
CHMP4CQ96CF2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.06□□□□□ -1.92
CHMP4CQ96CF2 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CHMP4CQ96CF2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.06□□□□□ -1.92
CHMP4CQ96CF2 AC044792.1-201ENST00000593294 196 ntBASIC3.06□□□□□ -1.92
CHMP4CQ96CF2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CHMP4CQ96CF2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHMP4CQ96CF2 Y_RNA.106-201ENST00000363189 100 ntBASIC3.05□□□□□ -1.92
CHMP4CQ96CF2 Y_RNA.364-201ENST00000365532 101 ntBASIC3.05□□□□□ -1.92
CHMP4CQ96CF2 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.05□□□□□ -1.92
CHMP4CQ96CF2 USP9YP16-201ENST00000430287 407 ntBASIC3.05□□□□□ -1.92
CHMP4CQ96CF2 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.05□□□□□ -1.92
CHMP4CQ96CF2 AC007677.1-201ENST00000445757 515 ntBASIC3.05□□□□□ -1.92
CHMP4CQ96CF2 USP9YP23-201ENST00000455085 407 ntBASIC3.05□□□□□ -1.92
CHMP4CQ96CF2 RNU7-26P-201ENST00000458980 63 ntBASIC3.05□□□□□ -1.92
CHMP4CQ96CF2 AC090096.1-201ENST00000489168 390 ntBASIC3.05□□□□□ -1.92
CHMP4CQ96CF2 RPPH1-2P-201ENST00000516688 293 ntBASIC3.05□□□□□ -1.92
CHMP4CQ96CF2 AC144568.1-201ENST00000520139 137 ntBASIC3.05□□□□□ -1.92
CHMP4CQ96CF2 SNRPGP18-201ENST00000553000 214 ntBASIC3.05□□□□□ -1.92
CHMP4CQ96CF2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.05□□□□□ -1.92
CHMP4CQ96CF2 AL356575.1-201ENST00000603008 283 ntBASIC3.05□□□□□ -1.92
CHMP4CQ96CF2 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHMP4CQ96CF2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.05□□□□□ -1.92
CHMP4CQ96CF2 Y_RNA.128-201ENST00000363391 112 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 RNU6-137P-201ENST00000363680 108 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 SNORD115-8-201ENST00000363856 82 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 SNORD32B-201ENST00000364460 84 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 Y_RNA.252-201ENST00000364556 101 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 SNORD115-38-201ENST00000365037 82 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 Y_RNA.395-201ENST00000383945 109 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 RNU6-546P-201ENST00000383991 107 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 MIR487A-201ENST00000385009 80 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 MIR561-201ENST00000385216 97 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 Y_RNA.605-201ENST00000410577 105 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 RNU2-32P-201ENST00000411193 191 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 MRPS18CP6-201ENST00000423587 223 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 Y_RNA.631-201ENST00000459607 101 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms