Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MTND4P5-201ENST00000435821 1374 ntBASIC1.96□□□□□ -2.1
VPS33AQ96AX1 RNU6-1013P-201ENST00000384180 107 ntBASIC1.95□□□□□ -2.1
VPS33AQ96AX1 SNORD115-47-201ENST00000391226 86 ntBASIC1.95□□□□□ -2.1
VPS33AQ96AX1 NDUFB4P4-201ENST00000404822 243 ntBASIC1.95□□□□□ -2.1
VPS33AQ96AX1 SNORA11.4-201ENST00000408823 129 ntBASIC1.95□□□□□ -2.1
VPS33AQ96AX1 AL358453.1-201ENST00000422522 250 ntBASIC1.95□□□□□ -2.1
VPS33AQ96AX1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VPS33AQ96AX1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.95□□□□□ -2.1
VPS33AQ96AX1 AC004386.2-201ENST00000441858 148 ntBASIC1.95□□□□□ -2.1
VPS33AQ96AX1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.95□□□□□ -2.1
VPS33AQ96AX1 AC009237.7-201ENST00000447357 229 ntBASIC1.95□□□□□ -2.1
VPS33AQ96AX1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS33AQ96AX1 RNA5SP57-201ENST00000459463 123 ntBASIC1.95□□□□□ -2.1
VPS33AQ96AX1 AC010531.2-201ENST00000465012 153 ntBASIC1.95□□□□□ -2.1
VPS33AQ96AX1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.95□□□□□ -2.1
VPS33AQ96AX1 ACA59.1-201ENST00000515966 143 ntBASIC1.95□□□□□ -2.1
VPS33AQ96AX1 RNVU1-2-201ENST00000516326 135 ntBASIC1.95□□□□□ -2.1
VPS33AQ96AX1 RNU2-34P-201ENST00000516534 121 ntBASIC1.95□□□□□ -2.1
VPS33AQ96AX1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS33AQ96AX1 SUMO2P18-201ENST00000518873 252 ntBASIC1.95□□□□□ -2.1
VPS33AQ96AX1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.95□□□□□ -2.1
VPS33AQ96AX1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS33AQ96AX1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.95□□□□□ -2.1
VPS33AQ96AX1 AP000907.4-201ENST00000604143 237 ntBASIC1.95□□□□□ -2.1
VPS33AQ96AX1 AC010900.2-201ENST00000604508 210 ntBASIC1.95□□□□□ -2.1
VPS33AQ96AX1 AC124303.1-201ENST00000605703 360 ntBASIC1.95□□□□□ -2.1
VPS33AQ96AX1 AC009318.2-201ENST00000610917 651 ntBASIC1.95□□□□□ -2.1
VPS33AQ96AX1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.95□□□□□ -2.1
VPS33AQ96AX1 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.95□□□□□ -2.1
VPS33AQ96AX1 AC139792.2-201ENST00000624218 587 ntBASIC1.95□□□□□ -2.1
VPS33AQ96AX1 AC022513.1-201ENST00000624512 117 ntBASIC1.95□□□□□ -2.1
VPS33AQ96AX1 BX322639.1-202ENST00000423987 2213 ntBASIC1.94□□□□□ -2.1
VPS33AQ96AX1 RNU4-9P-201ENST00000364951 139 ntBASIC1.94□□□□□ -2.1
VPS33AQ96AX1 SUMO2P12-201ENST00000405924 140 ntBASIC1.94□□□□□ -2.1
VPS33AQ96AX1 MIR1283-1-201ENST00000408494 87 ntBASIC1.94□□□□□ -2.1
VPS33AQ96AX1 RNA5SP100-201ENST00000410903 110 ntBASIC1.94□□□□□ -2.1
VPS33AQ96AX1 RNA5SP59-201ENST00000410922 110 ntBASIC1.94□□□□□ -2.1
VPS33AQ96AX1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.94□□□□□ -2.1
VPS33AQ96AX1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.94□□□□□ -2.1
VPS33AQ96AX1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.94□□□□□ -2.1
VPS33AQ96AX1 YWHAEP4-201ENST00000505390 198 ntBASIC1.94□□□□□ -2.1
VPS33AQ96AX1 AC067942.3-201ENST00000512025 362 ntBASIC1.94□□□□□ -2.1
VPS33AQ96AX1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.94□□□□□ -2.1
VPS33AQ96AX1 MIR5006-201ENST00000583027 110 ntBASIC1.94□□□□□ -2.1
VPS33AQ96AX1 MIR3942-201ENST00000585264 109 ntBASIC1.94□□□□□ -2.1
VPS33AQ96AX1 AP003465.2-201ENST00000602571 373 ntBASIC1.94□□□□□ -2.1
VPS33AQ96AX1 AC019193.3-201ENST00000609144 554 ntBASIC1.94□□□□□ -2.1
VPS33AQ96AX1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.94□□□□□ -2.1
VPS33AQ96AX1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.94□□□□□ -2.1
VPS33AQ96AX1 AC100810.6-201ENST00000638068 285 ntBASIC1.94□□□□□ -2.1
VPS33AQ96AX1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
VPS33AQ96AX1 SNORD115-32-201ENST00000364079 82 ntBASIC1.93□□□□□ -2.1
VPS33AQ96AX1 AL023284.1-201ENST00000403956 276 ntBASIC1.93□□□□□ -2.1
VPS33AQ96AX1 MIR1277-201ENST00000408536 78 ntBASIC1.93□□□□□ -2.1
VPS33AQ96AX1 MTCO3P46-201ENST00000425787 232 ntBASIC1.93□□□□□ -2.1
VPS33AQ96AX1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.93□□□□□ -2.1
VPS33AQ96AX1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.93□□□□□ -2.1
VPS33AQ96AX1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.93□□□□□ -2.1
VPS33AQ96AX1 SNRPGP18-201ENST00000553000 214 ntBASIC1.93□□□□□ -2.1
VPS33AQ96AX1 SUB1P4-201ENST00000566062 339 ntBASIC1.93□□□□□ -2.1
VPS33AQ96AX1 MIR4753-201ENST00000585119 83 ntBASIC1.93□□□□□ -2.1
VPS33AQ96AX1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.93□□□□□ -2.1
VPS33AQ96AX1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.93□□□□□ -2.1
VPS33AQ96AX1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.93□□□□□ -2.1
VPS33AQ96AX1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
VPS33AQ96AX1 RNU6-545P-201ENST00000362681 104 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 SNORD115-8-201ENST00000363856 82 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 SNORD115-38-201ENST00000365037 82 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
VPS33AQ96AX1 U8.10-201ENST00000384260 133 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 MIR548F1-201ENST00000408667 84 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 RNU4-53P-201ENST00000410828 140 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 NCOR1P3-201ENST00000420479 303 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.92□□□□□ -2.1
VPS33AQ96AX1 AL139415.2-201ENST00000431968 163 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 MTND4LP16-201ENST00000440828 295 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.92□□□□□ -2.1
VPS33AQ96AX1 AC114982.1-201ENST00000469402 321 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 AC097473.1-201ENST00000508142 408 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 RNA5SP54-201ENST00000516951 92 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 RNU6-856P-201ENST00000516959 98 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 IGKV3-31-201ENST00000523109 329 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 AC074050.1-201ENST00000563247 211 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 MIR5089-201ENST00000580047 84 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 SNRPGP19-201ENST00000603826 189 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 AC116312.1-201ENST00000606841 314 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 Y_RNA.783-201ENST00000613546 102 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.92□□□□□ -2.1
VPS33AQ96AX1 AC006504.8-201ENST00000621046 635 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 AC073869.6-201ENST00000640656 341 ntBASIC1.92□□□□□ -2.1
VPS33AQ96AX1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.92□□□□□ -2.1
VPS33AQ96AX1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
VPS33AQ96AX1 AL159152.1-201ENST00000635019 2587 ntBASIC1.91□□□□□ -2.1
VPS33AQ96AX1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.91□□□□□ -2.1
VPS33AQ96AX1 Z82205.1-201ENST00000428456 297 ntBASIC1.91□□□□□ -2.1
VPS33AQ96AX1 ATP5J2P3-201ENST00000451550 258 ntBASIC1.91□□□□□ -2.1
VPS33AQ96AX1 MTCO3P8-201ENST00000453691 755 ntBASIC1.91□□□□□ -2.1
VPS33AQ96AX1 AC112492.4-201ENST00000456549 352 ntBASIC1.91□□□□□ -2.1
VPS33AQ96AX1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.91□□□□□ -2.1
VPS33AQ96AX1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms