Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AL353193.1-201ENST00000421444 268 ntBASIC1.16□□□□□ -2.22
CPNE4Q96A23 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.16□□□□□ -2.22
CPNE4Q96A23 AC139712.2-201ENST00000424302 339 ntBASIC1.16□□□□□ -2.22
CPNE4Q96A23 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.16□□□□□ -2.22
CPNE4Q96A23 RN7SKP298-201ENST00000515950 94 ntBASIC1.16□□□□□ -2.22
CPNE4Q96A23 SNORA14.1-201ENST00000516113 141 ntBASIC1.16□□□□□ -2.22
CPNE4Q96A23 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.16□□□□□ -2.22
CPNE4Q96A23 MIR3660-201ENST00000584845 100 ntBASIC1.16□□□□□ -2.22
CPNE4Q96A23 AC023043.2-201ENST00000589678 1026 ntBASIC1.16□□□□□ -2.22
CPNE4Q96A23 AC016727.1-205ENST00000605437 569 ntBASIC1.16□□□□□ -2.22
CPNE4Q96A23 AC064807.4-201ENST00000607201 407 ntBASIC1.16□□□□□ -2.22
CPNE4Q96A23 AL121890.5-201ENST00000620848 304 ntBASIC1.16□□□□□ -2.22
CPNE4Q96A23 MIR3974-201ENST00000637126 96 ntBASIC1.16□□□□□ -2.22
CPNE4Q96A23 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
CPNE4Q96A23 Y_RNA.338-201ENST00000365320 114 ntBASIC1.15□□□□□ -2.23
CPNE4Q96A23 SNORA36A-201ENST00000384221 132 ntBASIC1.15□□□□□ -2.23
CPNE4Q96A23 Y_RNA.553-201ENST00000384670 102 ntBASIC1.15□□□□□ -2.23
CPNE4Q96A23 RNA5SP219-201ENST00000390940 113 ntBASIC1.15□□□□□ -2.23
CPNE4Q96A23 AL606923.1-201ENST00000406616 190 ntBASIC1.15□□□□□ -2.23
CPNE4Q96A23 MIR1267-201ENST00000408723 78 ntBASIC1.15□□□□□ -2.23
CPNE4Q96A23 RPL23AP36-201ENST00000413895 458 ntBASIC1.15□□□□□ -2.23
CPNE4Q96A23 AC090960.1-201ENST00000421072 306 ntBASIC1.15□□□□□ -2.23
CPNE4Q96A23 AC012306.1-201ENST00000423267 114 ntBASIC1.15□□□□□ -2.23
CPNE4Q96A23 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.15□□□□□ -2.23
CPNE4Q96A23 AL135790.2-201ENST00000437701 267 ntBASIC1.15□□□□□ -2.23
CPNE4Q96A23 AL121601.2-201ENST00000438019 707 ntBASIC1.15□□□□□ -2.23
CPNE4Q96A23 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.15□□□□□ -2.23
CPNE4Q96A23 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.15□□□□□ -2.23
CPNE4Q96A23 SNRPEP8-201ENST00000442866 260 ntBASIC1.15□□□□□ -2.23
CPNE4Q96A23 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.15□□□□□ -2.23
CPNE4Q96A23 Y_RNA.638-201ENST00000459374 113 ntBASIC1.15□□□□□ -2.23
CPNE4Q96A23 AC087477.1-201ENST00000465747 340 ntBASIC1.15□□□□□ -2.23
CPNE4Q96A23 AC004223.1-201ENST00000479840 271 ntBASIC1.15□□□□□ -2.23
CPNE4Q96A23 RN7SKP179-201ENST00000516126 217 ntBASIC1.15□□□□□ -2.23
CPNE4Q96A23 RNU6-1098P-201ENST00000516772 96 ntBASIC1.15□□□□□ -2.23
CPNE4Q96A23 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.15□□□□□ -2.23
CPNE4Q96A23 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.15□□□□□ -2.23
CPNE4Q96A23 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.15□□□□□ -2.23
CPNE4Q96A23 AC103705.1-201ENST00000619013 241 ntBASIC1.15□□□□□ -2.23
CPNE4Q96A23 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CPNE4Q96A23 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.15□□□□□ -2.23
CPNE4Q96A23 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.14□□□□□ -2.23
CPNE4Q96A23 Y_RNA.1-201ENST00000352915 104 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 SNORA25.8-201ENST00000364831 128 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 RNU6-296P-201ENST00000384608 107 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 SNORD73A-201ENST00000386062 65 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 RNU6-1106P-201ENST00000390845 107 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 Y_RNA.582-201ENST00000391023 95 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 CDK8P2-201ENST00000415020 547 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 MTCO1P21-201ENST00000416634 589 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.14□□□□□ -2.23
CPNE4Q96A23 RPS29P27-201ENST00000463711 170 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 MTCO3P38-201ENST00000468910 766 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 RPS26P55-201ENST00000471178 356 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 HMGN1P13-201ENST00000505795 138 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 AC097473.1-201ENST00000508142 408 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 RNU6-189P-201ENST00000516120 101 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 SNORD60.2-201ENST00000516883 86 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 CENPUP1-201ENST00000526649 1202 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 AP003033.1-201ENST00000527244 415 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.14□□□□□ -2.23
CPNE4Q96A23 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.14□□□□□ -2.23
CPNE4Q96A23 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.14□□□□□ -2.23
CPNE4Q96A23 AP001330.5-201ENST00000607176 411 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 AC017083.3-201ENST00000609955 700 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 AL354950.2-201ENST00000617939 290 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CPNE4Q96A23 ELL2P3-201ENST00000457883 1602 ntBASIC1.14□□□□□ -2.23
CPNE4Q96A23 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.14□□□□□ -2.23
CPNE4Q96A23 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CPNE4Q96A23 RNU6-438P-201ENST00000365561 103 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 MIR208B-201ENST00000401172 77 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CPNE4Q96A23 Z82205.1-201ENST00000428456 297 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 AL606489.2-201ENST00000433886 234 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 MTCO1P19-201ENST00000443487 500 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CPNE4Q96A23 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.13□□□□□ -2.23
CPNE4Q96A23 AC007395.1-201ENST00000451333 677 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 RNU7-14P-201ENST00000459331 62 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 AC010531.2-201ENST00000465012 153 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 RPS3AP17-201ENST00000472594 777 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 RPL36AP21-201ENST00000490372 323 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.13□□□□□ -2.23
CPNE4Q96A23 AC079140.3-201ENST00000511111 550 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 AC010486.3-201ENST00000511602 785 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 RNU5F-4P-201ENST00000516581 114 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 RNU6-1069P-201ENST00000516612 133 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 RNU6-612P-201ENST00000516909 102 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 SUMO2P18-201ENST00000518873 252 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.13□□□□□ -2.23
CPNE4Q96A23 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.13□□□□□ -2.23
CPNE4Q96A23 AL158211.1-201ENST00000566763 763 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 AC090517.1-201ENST00000569307 266 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 AC005668.1-201ENST00000571142 476 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 AC073413.2-201ENST00000604332 360 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 AL359821.1-201ENST00000605519 182 ntBASIC1.13□□□□□ -2.23
CPNE4Q96A23 AL355802.3-201ENST00000607571 545 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms