Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC067942.3-201ENST00000512025 362 ntBASIC1.74□□□□□ -2.13
PTP4A1Q93096 RNU6-1281P-201ENST00000516223 105 ntBASIC1.74□□□□□ -2.13
PTP4A1Q93096 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.74□□□□□ -2.13
PTP4A1Q93096 AC024909.2-201ENST00000553035 286 ntBASIC1.74□□□□□ -2.13
PTP4A1Q93096 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.74□□□□□ -2.13
PTP4A1Q93096 AP000907.4-201ENST00000604143 237 ntBASIC1.74□□□□□ -2.13
PTP4A1Q93096 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PTP4A1Q93096 MIR424-201ENST00000362227 98 ntBASIC1.73□□□□□ -2.13
PTP4A1Q93096 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
PTP4A1Q93096 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.73□□□□□ -2.13
PTP4A1Q93096 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.73□□□□□ -2.13
PTP4A1Q93096 USP9YP14-201ENST00000430663 563 ntBASIC1.73□□□□□ -2.13
PTP4A1Q93096 UBE2V1P8-201ENST00000437166 265 ntBASIC1.73□□□□□ -2.13
PTP4A1Q93096 Z83846.1-201ENST00000446798 265 ntBASIC1.73□□□□□ -2.13
PTP4A1Q93096 OR2AQ1P-201ENST00000451972 200 ntBASIC1.73□□□□□ -2.13
PTP4A1Q93096 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.73□□□□□ -2.13
PTP4A1Q93096 RNU6-948P-201ENST00000516374 107 ntBASIC1.73□□□□□ -2.13
PTP4A1Q93096 RNA5SP481-201ENST00000516814 122 ntBASIC1.73□□□□□ -2.13
PTP4A1Q93096 RNU6-856P-201ENST00000516959 98 ntBASIC1.73□□□□□ -2.13
PTP4A1Q93096 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
PTP4A1Q93096 ZNF355P-201ENST00000427301 3216 ntBASIC1.73□□□□□ -2.13
PTP4A1Q93096 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PTP4A1Q93096 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.72□□□□□ -2.13
PTP4A1Q93096 RNU6-545P-201ENST00000362681 104 ntBASIC1.72□□□□□ -2.13
PTP4A1Q93096 RNU6-1019P-201ENST00000364424 107 ntBASIC1.72□□□□□ -2.13
PTP4A1Q93096 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
PTP4A1Q93096 CALM2P3-201ENST00000400429 449 ntBASIC1.72□□□□□ -2.13
PTP4A1Q93096 MIR1267-201ENST00000408723 78 ntBASIC1.72□□□□□ -2.13
PTP4A1Q93096 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.72□□□□□ -2.13
PTP4A1Q93096 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.72□□□□□ -2.13
PTP4A1Q93096 NDUFA5P4-201ENST00000436704 385 ntBASIC1.72□□□□□ -2.13
PTP4A1Q93096 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.72□□□□□ -2.13
PTP4A1Q93096 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.72□□□□□ -2.13
PTP4A1Q93096 AC004386.2-201ENST00000441858 148 ntBASIC1.72□□□□□ -2.13
PTP4A1Q93096 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.72□□□□□ -2.13
PTP4A1Q93096 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.72□□□□□ -2.13
PTP4A1Q93096 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.72□□□□□ -2.13
PTP4A1Q93096 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.72□□□□□ -2.13
PTP4A1Q93096 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.72□□□□□ -2.13
PTP4A1Q93096 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.72□□□□□ -2.13
PTP4A1Q93096 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.72□□□□□ -2.13
PTP4A1Q93096 AC016925.2-201ENST00000605108 242 ntBASIC1.72□□□□□ -2.13
PTP4A1Q93096 RNU6-89P-201ENST00000606519 100 ntBASIC1.72□□□□□ -2.13
PTP4A1Q93096 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
PTP4A1Q93096 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.72□□□□□ -2.13
PTP4A1Q93096 AC022513.1-201ENST00000624512 117 ntBASIC1.72□□□□□ -2.13
PTP4A1Q93096 AC010615.1-201ENST00000594254 1764 ntBASIC1.72□□□□□ -2.13
PTP4A1Q93096 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
PTP4A1Q93096 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
PTP4A1Q93096 MIR126-201ENST00000362291 85 ntBASIC1.71□□□□□ -2.14
PTP4A1Q93096 SNORD113-7-201ENST00000363762 77 ntBASIC1.71□□□□□ -2.14
PTP4A1Q93096 RNU1-96P-201ENST00000364163 162 ntBASIC1.71□□□□□ -2.14
PTP4A1Q93096 RNU4-42P-201ENST00000364738 142 ntBASIC1.71□□□□□ -2.14
PTP4A1Q93096 RNU6-784P-201ENST00000384330 106 ntBASIC1.71□□□□□ -2.14
PTP4A1Q93096 Y_RNA.559-201ENST00000384686 107 ntBASIC1.71□□□□□ -2.14
PTP4A1Q93096 RNU6-360P-201ENST00000390944 104 ntBASIC1.71□□□□□ -2.14
PTP4A1Q93096 MTCO3P29-201ENST00000432119 779 ntBASIC1.71□□□□□ -2.14
PTP4A1Q93096 AL645568.3-201ENST00000433683 316 ntBASIC1.71□□□□□ -2.14
PTP4A1Q93096 AL353572.1-201ENST00000442490 417 ntBASIC1.71□□□□□ -2.14
PTP4A1Q93096 AC009237.7-201ENST00000447357 229 ntBASIC1.71□□□□□ -2.14
PTP4A1Q93096 AL513124.1-201ENST00000450410 614 ntBASIC1.71□□□□□ -2.14
PTP4A1Q93096 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.71□□□□□ -2.14
PTP4A1Q93096 CPDP1-201ENST00000579660 283 ntBASIC1.71□□□□□ -2.14
PTP4A1Q93096 MIR4422-201ENST00000581938 83 ntBASIC1.71□□□□□ -2.14
PTP4A1Q93096 AC146944.4-201ENST00000602697 718 ntBASIC1.71□□□□□ -2.14
PTP4A1Q93096 CTHRC1P1-201ENST00000605383 469 ntBASIC1.71□□□□□ -2.14
PTP4A1Q93096 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.71□□□□□ -2.14
PTP4A1Q93096 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.71□□□□□ -2.14
PTP4A1Q93096 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.71□□□□□ -2.14
PTP4A1Q93096 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
PTP4A1Q93096 WWP1P1-201ENST00000466609 2769 ntBASIC1.71□□□□□ -2.14
PTP4A1Q93096 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
PTP4A1Q93096 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
PTP4A1Q93096 Y_RNA.67-201ENST00000362870 100 ntBASIC1.7□□□□□ -2.14
PTP4A1Q93096 RNU6-790P-201ENST00000384479 105 ntBASIC1.7□□□□□ -2.14
PTP4A1Q93096 AC019129.1-201ENST00000403786 261 ntBASIC1.7□□□□□ -2.14
PTP4A1Q93096 RNU2-20P-201ENST00000410425 191 ntBASIC1.7□□□□□ -2.14
PTP4A1Q93096 RNU6-1068P-201ENST00000410958 103 ntBASIC1.7□□□□□ -2.14
PTP4A1Q93096 RPS20P15-201ENST00000412792 311 ntBASIC1.7□□□□□ -2.14
PTP4A1Q93096 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.7□□□□□ -2.14
PTP4A1Q93096 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.7□□□□□ -2.14
PTP4A1Q93096 RPS29P21-201ENST00000496272 170 ntBASIC1.7□□□□□ -2.14
PTP4A1Q93096 AC091435.1-201ENST00000505442 584 ntBASIC1.7□□□□□ -2.14
PTP4A1Q93096 RNU6-1146P-201ENST00000516282 102 ntBASIC1.7□□□□□ -2.14
PTP4A1Q93096 MTND1P35-201ENST00000526739 508 ntBASIC1.7□□□□□ -2.14
PTP4A1Q93096 MRPS36P4-201ENST00000534436 298 ntBASIC1.7□□□□□ -2.14
PTP4A1Q93096 DEFB122-202ENST00000569013 197 ntBASIC1.7□□□□□ -2.14
PTP4A1Q93096 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.7□□□□□ -2.14
PTP4A1Q93096 AC010928.2-201ENST00000588017 287 ntBASIC1.7□□□□□ -2.14
PTP4A1Q93096 AC016727.2-201ENST00000603988 621 ntBASIC1.7□□□□□ -2.14
PTP4A1Q93096 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.7□□□□□ -2.14
PTP4A1Q93096 AC087241.4-201ENST00000612441 480 ntBASIC1.7□□□□□ -2.14
PTP4A1Q93096 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.7□□□□□ -2.14
PTP4A1Q93096 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.7□□□□□ -2.14
PTP4A1Q93096 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
PTP4A1Q93096 RNU6-862P-201ENST00000362804 105 ntBASIC1.69□□□□□ -2.14
PTP4A1Q93096 SNORA72.2-201ENST00000365028 127 ntBASIC1.69□□□□□ -2.14
PTP4A1Q93096 RNU6-338P-201ENST00000383888 105 ntBASIC1.69□□□□□ -2.14
PTP4A1Q93096 RNU6-1235P-201ENST00000384559 107 ntBASIC1.69□□□□□ -2.14
PTP4A1Q93096 NFU1P2-201ENST00000448700 469 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms