Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 RNU4-42P-201ENST00000364738 142 ntBASIC2.79□□□□□ -1.96
ATP2A3Q93084 SNORD32A-201ENST00000364805 84 ntBASIC2.79□□□□□ -1.96
ATP2A3Q93084 Y_RNA.389-201ENST00000383924 113 ntBASIC2.79□□□□□ -1.96
ATP2A3Q93084 RNU6-142P-201ENST00000384019 107 ntBASIC2.79□□□□□ -1.96
ATP2A3Q93084 Y_RNA.574-201ENST00000384766 95 ntBASIC2.79□□□□□ -1.96
ATP2A3Q93084 RNU2-23P-201ENST00000410545 195 ntBASIC2.79□□□□□ -1.96
ATP2A3Q93084 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.79□□□□□ -1.96
ATP2A3Q93084 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.79□□□□□ -1.96
ATP2A3Q93084 HSPE1P4-201ENST00000550617 308 ntBASIC2.79□□□□□ -1.96
ATP2A3Q93084 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.79□□□□□ -1.96
ATP2A3Q93084 AC007375.1-201ENST00000554513 578 ntBASIC2.79□□□□□ -1.96
ATP2A3Q93084 AC110588.1-201ENST00000559699 137 ntBASIC2.79□□□□□ -1.96
ATP2A3Q93084 MIR5696-201ENST00000578474 85 ntBASIC2.79□□□□□ -1.96
ATP2A3Q93084 AC105245.1-201ENST00000581934 244 ntBASIC2.79□□□□□ -1.96
ATP2A3Q93084 MIR5194-201ENST00000582634 120 ntBASIC2.79□□□□□ -1.96
ATP2A3Q93084 7SK.7-201ENST00000603504 247 ntBASIC2.79□□□□□ -1.96
ATP2A3Q93084 MIR1244-1-201ENST00000612829 85 ntBASIC2.79□□□□□ -1.96
ATP2A3Q93084 MIR1244-3-201ENST00000635744 85 ntBASIC2.79□□□□□ -1.96
ATP2A3Q93084 MIR1244-2-201ENST00000636449 85 ntBASIC2.79□□□□□ -1.96
ATP2A3Q93084 MIR1244-4-202ENST00000636813 85 ntBASIC2.79□□□□□ -1.96
ATP2A3Q93084 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
ATP2A3Q93084 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.79□□□□□ -1.96
ATP2A3Q93084 RNU6-874P-201ENST00000362390 105 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 Y_RNA.26-201ENST00000362539 101 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 RNY1P16-201ENST00000363063 111 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 Y_RNA.149-201ENST00000363558 117 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 Y_RNA.314-201ENST00000365114 102 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 AC097463.2-201ENST00000421074 142 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 RPL23AP95-201ENST00000426806 265 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 AC112220.1-201ENST00000434628 355 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 AL513328.1-201ENST00000446460 224 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 AC090525.1-201ENST00000479116 478 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 RPL17P19-201ENST00000489069 552 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 AC104564.1-201ENST00000493028 407 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 AC016632.1-201ENST00000503994 196 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 MRPS35P2-201ENST00000508242 191 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.78□□□□□ -1.96
ATP2A3Q93084 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.78□□□□□ -1.96
ATP2A3Q93084 Y_RNA.721-201ENST00000517207 102 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 AC109329.2-201ENST00000519658 482 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.78□□□□□ -1.96
ATP2A3Q93084 GNAI2P1-201ENST00000541815 315 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 MIR5188-201ENST00000583467 113 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.78□□□□□ -1.96
ATP2A3Q93084 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 MIR6817-201ENST00000615588 66 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.78□□□□□ -1.96
ATP2A3Q93084 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ATP2A3Q93084 AC233981.2-201ENST00000611524 1614 ntBASIC2.78□□□□□ -1.96
ATP2A3Q93084 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.78□□□□□ -1.96
ATP2A3Q93084 SNORA63.7-201ENST00000365579 123 ntBASIC2.77□□□□□ -1.97
ATP2A3Q93084 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.77□□□□□ -1.97
ATP2A3Q93084 RNU6-968P-201ENST00000384076 107 ntBASIC2.77□□□□□ -1.97
ATP2A3Q93084 MT-TR-201ENST00000387439 65 ntBASIC2.77□□□□□ -1.97
ATP2A3Q93084 RN7SKP61-201ENST00000410642 295 ntBASIC2.77□□□□□ -1.97
ATP2A3Q93084 RNA5SP508-201ENST00000411327 119 ntBASIC2.77□□□□□ -1.97
ATP2A3Q93084 OOSP1P1-201ENST00000423265 274 ntBASIC2.77□□□□□ -1.97
ATP2A3Q93084 AL513124.1-201ENST00000450410 614 ntBASIC2.77□□□□□ -1.97
ATP2A3Q93084 AC079354.2-201ENST00000453523 154 ntBASIC2.77□□□□□ -1.97
ATP2A3Q93084 AC015911.1-201ENST00000495111 156 ntBASIC2.77□□□□□ -1.97
ATP2A3Q93084 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.77□□□□□ -1.97
ATP2A3Q93084 AC115990.1-201ENST00000526957 301 ntBASIC2.77□□□□□ -1.97
ATP2A3Q93084 AC004817.2-201ENST00000561794 651 ntBASIC2.77□□□□□ -1.97
ATP2A3Q93084 AL449363.1-201ENST00000617815 186 ntBASIC2.77□□□□□ -1.97
ATP2A3Q93084 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.77□□□□□ -1.97
ATP2A3Q93084 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
ATP2A3Q93084 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
ATP2A3Q93084 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.76□□□□□ -1.97
ATP2A3Q93084 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.76□□□□□ -1.97
ATP2A3Q93084 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
ATP2A3Q93084 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
ATP2A3Q93084 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
ATP2A3Q93084 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.76□□□□□ -1.97
ATP2A3Q93084 RNU6-212P-201ENST00000362642 104 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 RNU6-1010P-201ENST00000362757 107 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 RNA5SP68-201ENST00000363885 119 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 RNU6-595P-201ENST00000363944 107 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 RNA5SP125-201ENST00000364843 120 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 Y_RNA.396-201ENST00000383949 103 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 Y_RNA.504-201ENST00000384481 104 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 RNU6-1109P-201ENST00000391187 107 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 U6atac.2-201ENST00000408644 118 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 RNU6-1156P-201ENST00000410365 100 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 RNU6-1140P-201ENST00000410517 106 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 CYCSP48-201ENST00000417124 323 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.76□□□□□ -1.97
ATP2A3Q93084 AC078809.1-201ENST00000427601 140 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 CBX3P6-201ENST00000430257 527 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 AC244670.1-201ENST00000436879 112 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 AC099799.1-201ENST00000439809 192 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 GPM6BP3-201ENST00000442797 145 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 OR2AQ1P-201ENST00000451972 200 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 RPS3P1-201ENST00000456781 192 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.76□□□□□ -1.97
ATP2A3Q93084 AC091874.1-201ENST00000511402 339 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.76□□□□□ -1.97
ATP2A3Q93084 AC131281.1-201ENST00000522984 164 ntBASIC2.76□□□□□ -1.97
ATP2A3Q93084 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.76□□□□□ -1.97
ATP2A3Q93084 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms