Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RPL17P19-201ENST00000489069 552 ntBASIC2.31□□□□□ -2.04
SLC44A1Q8WWI5 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.31□□□□□ -2.04
SLC44A1Q8WWI5 AL590705.4-201ENST00000532209 134 ntBASIC2.31□□□□□ -2.04
SLC44A1Q8WWI5 SUB1P3-201ENST00000564581 315 ntBASIC2.31□□□□□ -2.04
SLC44A1Q8WWI5 MIR5007-201ENST00000583098 95 ntBASIC2.31□□□□□ -2.04
SLC44A1Q8WWI5 7SK.7-201ENST00000603504 247 ntBASIC2.31□□□□□ -2.04
SLC44A1Q8WWI5 AL670379.2-201ENST00000604983 252 ntBASIC2.31□□□□□ -2.04
SLC44A1Q8WWI5 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.31□□□□□ -2.04
SLC44A1Q8WWI5 MIR6766-201ENST00000622641 72 ntBASIC2.31□□□□□ -2.04
SLC44A1Q8WWI5 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.31□□□□□ -2.04
SLC44A1Q8WWI5 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SLC44A1Q8WWI5 RNY1P16-201ENST00000363063 111 ntBASIC2.3□□□□□ -2.04
SLC44A1Q8WWI5 Y_RNA.146-201ENST00000363549 102 ntBASIC2.3□□□□□ -2.04
SLC44A1Q8WWI5 RNA5SP240-201ENST00000365355 128 ntBASIC2.3□□□□□ -2.04
SLC44A1Q8WWI5 XGY1-201ENST00000381172 446 ntBASIC2.3□□□□□ -2.04
SLC44A1Q8WWI5 AC009963.1-201ENST00000417265 157 ntBASIC2.3□□□□□ -2.04
SLC44A1Q8WWI5 IPO7P1-201ENST00000442031 636 ntBASIC2.3□□□□□ -2.04
SLC44A1Q8WWI5 OR2AQ1P-201ENST00000451972 200 ntBASIC2.3□□□□□ -2.04
SLC44A1Q8WWI5 CYP2C59P-201ENST00000457790 269 ntBASIC2.3□□□□□ -2.04
SLC44A1Q8WWI5 snoU13.30-201ENST00000458951 104 ntBASIC2.3□□□□□ -2.04
SLC44A1Q8WWI5 AC093303.1-201ENST00000514549 295 ntBASIC2.3□□□□□ -2.04
SLC44A1Q8WWI5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.3□□□□□ -2.04
SLC44A1Q8WWI5 AC010928.2-201ENST00000588017 287 ntBASIC2.3□□□□□ -2.04
SLC44A1Q8WWI5 RMST_6.1-201ENST00000611980 203 ntBASIC2.3□□□□□ -2.04
SLC44A1Q8WWI5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.3□□□□□ -2.04
SLC44A1Q8WWI5 AC008121.3-201ENST00000618726 433 ntBASIC2.3□□□□□ -2.04
SLC44A1Q8WWI5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.3□□□□□ -2.04
SLC44A1Q8WWI5 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SLC44A1Q8WWI5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SLC44A1Q8WWI5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
SLC44A1Q8WWI5 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 Y_RNA.48-201ENST00000362710 103 ntBASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 RNU4-76P-201ENST00000364509 141 ntBASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 SNORA12.2-201ENST00000391040 156 ntBASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 AC090515.1-201ENST00000465295 476 ntBASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 RN7SL429P-201ENST00000479090 223 ntBASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 RN7SL489P-201ENST00000486185 223 ntBASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 RN7SL327P-201ENST00000488659 223 ntBASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 AC022493.2-201ENST00000506122 481 ntBASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 RNU6-470P-201ENST00000515954 104 ntBASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 SNORA48.11-201ENST00000517015 89 ntBASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 AC021269.2-201ENST00000532318 330 ntBASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 AC018630.3-201ENST00000542637 96 ntBASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 AC080078.3-201ENST00000605407 463 ntBASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 AC046143.2-201ENST00000609789 160 ntBASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 PCGEM1.1-201ENST00000613431 131 ntBASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 RN7SL853P-201ENST00000617250 223 ntBASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.29□□□□□ -2.04
SLC44A1Q8WWI5 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 snoU2_19.1-201ENST00000362361 80 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 RNU6-1115P-201ENST00000362490 106 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 RNU6-490P-201ENST00000362985 107 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 RNU6-137P-201ENST00000363680 108 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 SNORD115-8-201ENST00000363856 82 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 SNORD115-38-201ENST00000365037 82 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 SNORD42.2-201ENST00000365570 69 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 RNU6-17P-201ENST00000384245 107 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 U8.10-201ENST00000384260 133 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 RNU6-18P-201ENST00000384527 107 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 MIR559-201ENST00000385188 96 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 Y_RNA.579-201ENST00000390939 94 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 SNORA46.1-201ENST00000391069 153 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 HMGB3P2-201ENST00000411913 584 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 AL590556.1-201ENST00000423231 483 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 MTCYBP10-201ENST00000424905 650 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 RPL23AP50-201ENST00000434149 455 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 Z82188.1-201ENST00000436709 154 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 AL161788.1-201ENST00000441805 169 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 Y_RNA.639-201ENST00000458981 102 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 AC068781.1-201ENST00000488231 618 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 AC079804.2-201ENST00000490376 200 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 AC145146.1-201ENST00000496370 254 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 AC234781.5-201ENST00000508429 271 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 RNU7-175P-201ENST00000515915 61 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 RNU6-1170P-201ENST00000515974 106 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 RNU6-264P-201ENST00000517134 104 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 RNU6-586P-201ENST00000517265 104 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 AL138963.2-201ENST00000605137 226 ntBASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SLC44A1Q8WWI5 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.27□□□□□ -2.05
SLC44A1Q8WWI5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SLC44A1Q8WWI5 RNU6-1159P-201ENST00000362933 107 ntBASIC2.27□□□□□ -2.05
SLC44A1Q8WWI5 SNORD32B-201ENST00000364460 84 ntBASIC2.27□□□□□ -2.05
SLC44A1Q8WWI5 RNA5SP125-201ENST00000364843 120 ntBASIC2.27□□□□□ -2.05
SLC44A1Q8WWI5 Y_RNA.395-201ENST00000383945 109 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms