Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 Y_RNA.679-201ENST00000516416 91 ntBASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 MIR7153-201ENST00000637758 57 ntBASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.44□□□□□ -1.86
SH3RF3Q8TEJ3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 Y_RNA.308-201ENST00000365043 101 ntBASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 Y_RNA.353-201ENST00000365440 108 ntBASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 RNU6-44P-201ENST00000384045 107 ntBASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 RNU6-658P-201ENST00000384606 106 ntBASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 SNORA46-201ENST00000384762 135 ntBASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 RNU6-1025P-201ENST00000410629 104 ntBASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 AC087499.2-201ENST00000432861 149 ntBASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 AC016700.2-201ENST00000446011 156 ntBASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 AC125238.1-201ENST00000448842 249 ntBASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 AL160314.1-201ENST00000490836 438 ntBASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 AK3P2-201ENST00000507976 429 ntBASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 SNORA27.4-201ENST00000516650 95 ntBASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 RPL21P9-201ENST00000556149 474 ntBASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 MIR4319-201ENST00000577285 85 ntBASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 AL161798.1-201ENST00000604630 131 ntBASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 RPL23AP88-201ENST00000605759 454 ntBASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 IGHVIII-44-202ENST00000636235 289 ntBASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
SH3RF3Q8TEJ3 MIR412-201ENST00000362142 91 ntBASIC3.42□□□□□ -1.86
SH3RF3Q8TEJ3 MIR148B-201ENST00000362252 99 ntBASIC3.42□□□□□ -1.86
SH3RF3Q8TEJ3 RNA5SP205-201ENST00000364653 136 ntBASIC3.42□□□□□ -1.86
SH3RF3Q8TEJ3 Y_RNA.400-201ENST00000383963 111 ntBASIC3.42□□□□□ -1.86
SH3RF3Q8TEJ3 MIR301A-201ENST00000385261 86 ntBASIC3.42□□□□□ -1.86
SH3RF3Q8TEJ3 NDUFB4P7-201ENST00000423198 363 ntBASIC3.42□□□□□ -1.86
SH3RF3Q8TEJ3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.42□□□□□ -1.86
SH3RF3Q8TEJ3 snoU13.30-201ENST00000458951 104 ntBASIC3.42□□□□□ -1.86
SH3RF3Q8TEJ3 AC073901.1-201ENST00000462471 408 ntBASIC3.42□□□□□ -1.86
SH3RF3Q8TEJ3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.42□□□□□ -1.86
SH3RF3Q8TEJ3 AC093331.1-201ENST00000521474 169 ntBASIC3.42□□□□□ -1.86
SH3RF3Q8TEJ3 AC107016.2-201ENST00000547968 190 ntBASIC3.42□□□□□ -1.86
SH3RF3Q8TEJ3 AK6P2-201ENST00000549020 471 ntBASIC3.42□□□□□ -1.86
SH3RF3Q8TEJ3 MIR4782-201ENST00000577987 79 ntBASIC3.42□□□□□ -1.86
SH3RF3Q8TEJ3 RPL12P50-201ENST00000603116 116 ntBASIC3.42□□□□□ -1.86
SH3RF3Q8TEJ3 MTND1P7-201ENST00000632801 297 ntBASIC3.42□□□□□ -1.86
SH3RF3Q8TEJ3 AC135776.4-201ENST00000624300 1904 ntBASIC3.42□□□□□ -1.86
SH3RF3Q8TEJ3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SH3RF3Q8TEJ3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 SNORA25.1-201ENST00000362326 128 ntBASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 Y_RNA.343-201ENST00000365354 112 ntBASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 RNU6-17P-201ENST00000384245 107 ntBASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 RNU6-18P-201ENST00000384527 107 ntBASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 MIR186-201ENST00000384988 86 ntBASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 RNU6-257P-201ENST00000410238 98 ntBASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 AL513331.1-201ENST00000411908 397 ntBASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 UQCRBP2-201ENST00000447827 297 ntBASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 ATP5F1P5-201ENST00000526403 760 ntBASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 AC008121.1-201ENST00000603244 268 ntBASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 AC099778.2-201ENST00000610904 211 ntBASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 AC073349.3-201ENST00000617616 186 ntBASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 AC091895.1-201ENST00000624494 256 ntBASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 AC100821.1-201ENST00000523153 2479 ntBASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SH3RF3Q8TEJ3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
SH3RF3Q8TEJ3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.4□□□□□ -1.86
SH3RF3Q8TEJ3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
SH3RF3Q8TEJ3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 AC062016.1-201ENST00000355719 319 ntBASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 MIR410-201ENST00000362222 80 ntBASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 RNU6-653P-201ENST00000363074 106 ntBASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 RNU6-1167P-201ENST00000363227 94 ntBASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 Y_RNA.136-201ENST00000363444 102 ntBASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 RNU6-153P-201ENST00000364422 104 ntBASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 Y_RNA.261-201ENST00000364631 102 ntBASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 RNU6-805P-201ENST00000365643 106 ntBASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 Y_RNA.488-201ENST00000384403 102 ntBASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 Y_RNA.570-201ENST00000384750 101 ntBASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 AL035461.1-201ENST00000421490 332 ntBASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 AC009237.8-201ENST00000445492 379 ntBASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 AC009237.7-201ENST00000447357 229 ntBASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 AC114982.1-201ENST00000469402 321 ntBASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 AC010265.1-201ENST00000513509 211 ntBASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 SCARNA15.2-201ENST00000516409 127 ntBASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 AC068657.1-201ENST00000520807 306 ntBASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms