Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AL121890.5-201ENST00000620848 304 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 AC007494.3-201ENST00000624660 743 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 SNORA43.4-201ENST00000629559 138 ntBASIC0.95□□□□□ -2.26
LMX1AQ8TE12 SNORD33-201ENST00000362761 85 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 U3.9-201ENST00000363823 204 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 SNORA25.8-201ENST00000364831 128 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 SNORA32.2-201ENST00000384049 122 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 RNU6-378P-201ENST00000384324 107 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 MIR513A1-201ENST00000385138 129 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 MIR1267-201ENST00000408723 78 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 AL161935.2-201ENST00000414627 60 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 MTCO1P21-201ENST00000416634 589 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 BX295541.1-201ENST00000417774 250 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.94□□□□□ -2.26
LMX1AQ8TE12 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.94□□□□□ -2.26
LMX1AQ8TE12 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
LMX1AQ8TE12 JTBP1-201ENST00000441314 247 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 SNRPEP8-201ENST00000442866 260 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.94□□□□□ -2.26
LMX1AQ8TE12 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
LMX1AQ8TE12 RPS27P1-201ENST00000450552 247 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.94□□□□□ -2.26
LMX1AQ8TE12 AC016632.1-201ENST00000503994 196 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.94□□□□□ -2.26
LMX1AQ8TE12 AC097473.1-201ENST00000508142 408 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 AC091874.1-201ENST00000511402 339 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 RNU6-1098P-201ENST00000516772 96 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 RNA5SP480-201ENST00000516840 109 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 CYP4A27P-201ENST00000567218 190 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 Z84480.1-201ENST00000605131 311 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 AL355802.3-201ENST00000607571 545 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 AL603755.1-201ENST00000619504 163 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 AC136475.10-201ENST00000620253 385 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 AC120349.3-201ENST00000624377 529 ntBASIC0.94□□□□□ -2.26
LMX1AQ8TE12 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.94□□□□□ -2.26
LMX1AQ8TE12 MIR373-201ENST00000362273 69 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 RNU6-266P-201ENST00000364225 107 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 Y_RNA.255-201ENST00000364581 97 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 RNY3P10-201ENST00000384764 102 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 MIR598-201ENST00000384868 97 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 MIR7-2-201ENST00000384970 110 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 MIR532-201ENST00000385025 91 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 RNU6-903P-201ENST00000391270 109 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 SNORA26.8-201ENST00000391306 124 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.93□□□□□ -2.26
LMX1AQ8TE12 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.93□□□□□ -2.26
LMX1AQ8TE12 CST2P1-201ENST00000425770 87 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.93□□□□□ -2.26
LMX1AQ8TE12 MTCO2P11-201ENST00000431069 680 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 FTH1P12-201ENST00000432137 551 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 AC245047.4-201ENST00000433189 144 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 AC027119.1-201ENST00000440877 241 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.93□□□□□ -2.26
LMX1AQ8TE12 RPS27AP8-201ENST00000452665 445 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.93□□□□□ -2.26
LMX1AQ8TE12 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.93□□□□□ -2.26
LMX1AQ8TE12 AL137161.1-201ENST00000532231 390 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 AC103996.1-201ENST00000555468 102 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 AC021231.3-201ENST00000558497 370 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 MIR5094-201ENST00000578766 85 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 MIR3973-201ENST00000579824 107 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 MIR4760-201ENST00000585040 80 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 RSL24D1P11-201ENST00000591045 491 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 AC025449.1-201ENST00000603896 529 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 AC107304.1-201ENST00000604229 296 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 Z94722.1-201ENST00000604328 474 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 Z98751.3-201ENST00000604447 521 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 AC023510.2-201ENST00000622162 746 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.93□□□□□ -2.26
LMX1AQ8TE12 MTND4P14-201ENST00000435799 1354 ntBASIC0.93□□□□□ -2.26
LMX1AQ8TE12 RNU6-552P-201ENST00000362869 119 ntBASIC0.92□□□□□ -2.26
LMX1AQ8TE12 SNORA63D-201ENST00000364359 132 ntBASIC0.92□□□□□ -2.26
LMX1AQ8TE12 RNU4-56P-201ENST00000364700 142 ntBASIC0.92□□□□□ -2.26
LMX1AQ8TE12 SNORD1A-201ENST00000364968 72 ntBASIC0.92□□□□□ -2.26
LMX1AQ8TE12 RNU6-827P-201ENST00000365553 106 ntBASIC0.92□□□□□ -2.26
LMX1AQ8TE12 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.92□□□□□ -2.26
LMX1AQ8TE12 RNU6-456P-201ENST00000384493 107 ntBASIC0.92□□□□□ -2.26
LMX1AQ8TE12 AL117342.1-201ENST00000404861 406 ntBASIC0.92□□□□□ -2.26
LMX1AQ8TE12 RPL37P10-201ENST00000412884 288 ntBASIC0.92□□□□□ -2.26
LMX1AQ8TE12 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.92□□□□□ -2.26
LMX1AQ8TE12 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.92□□□□□ -2.26
LMX1AQ8TE12 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.92□□□□□ -2.26
LMX1AQ8TE12 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.92□□□□□ -2.26
LMX1AQ8TE12 AC002486.1-201ENST00000435098 391 ntBASIC0.92□□□□□ -2.26
LMX1AQ8TE12 MTCO2P3-201ENST00000442543 421 ntBASIC0.92□□□□□ -2.26
LMX1AQ8TE12 RPS29P28-201ENST00000446439 141 ntBASIC0.92□□□□□ -2.26
LMX1AQ8TE12 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.92□□□□□ -2.26
LMX1AQ8TE12 RNU7-167P-201ENST00000459160 62 ntBASIC0.92□□□□□ -2.26
LMX1AQ8TE12 AC010531.2-201ENST00000465012 153 ntBASIC0.92□□□□□ -2.26
LMX1AQ8TE12 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.92□□□□□ -2.26
LMX1AQ8TE12 HMGN1P13-201ENST00000505795 138 ntBASIC0.92□□□□□ -2.26
LMX1AQ8TE12 AC108078.1-201ENST00000508073 725 ntBASIC0.92□□□□□ -2.26
LMX1AQ8TE12 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.92□□□□□ -2.26
LMX1AQ8TE12 AP002963.1-201ENST00000530590 184 ntBASIC0.92□□□□□ -2.26
LMX1AQ8TE12 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.92□□□□□ -2.26
LMX1AQ8TE12 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.92□□□□□ -2.26
LMX1AQ8TE12 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.92□□□□□ -2.26
LMX1AQ8TE12 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.92□□□□□ -2.26
LMX1AQ8TE12 CTHRC1P1-201ENST00000605383 469 ntBASIC0.92□□□□□ -2.26
LMX1AQ8TE12 AC064807.4-201ENST00000607201 407 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms