Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 MTND1P30-201ENST00000441241 901 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AL133217.1-201ENST00000450980 425 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC064807.4-201ENST00000607201 407 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 PCGEM1.1-201ENST00000613431 131 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 Y_RNA.576-201ENST00000384781 102 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC104850.1-201ENST00000435940 476 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 PSMC1P5-201ENST00000512850 177 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC021231.3-201ENST00000558497 370 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 MIR5094-201ENST00000578766 85 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC073539.2-201ENST00000597113 165 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AP000907.4-201ENST00000604143 237 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 SNORD31B-201ENST00000364977 69 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 RNU6-298P-201ENST00000390888 96 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 OR9R1P-201ENST00000412200 877 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 UBE2V1P10-201ENST00000414685 269 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 COX6CP10-201ENST00000416832 224 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 TOMM22P2-201ENST00000430735 237 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 LARP1BP3-201ENST00000437229 869 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 HMGN1P12-201ENST00000499125 195 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.14□□□□□ -2.39
SYNE1Q8NF91 MIR544B-201ENST00000582372 78 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 AC026585.1-201ENST00000619582 524 ntBASIC0.14□□□□□ -2.39
SYNE1Q8NF91 RNU1-76P-201ENST00000362903 159 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 RNU6-61P-201ENST00000365528 109 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 Y_RNA.568-201ENST00000384742 113 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 MIR300-201ENST00000401138 83 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 RNU6-57P-201ENST00000411348 103 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.13□□□□□ -2.39
SYNE1Q8NF91 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.13□□□□□ -2.39
SYNE1Q8NF91 RPS23P5-201ENST00000495419 428 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.13□□□□□ -2.39
SYNE1Q8NF91 RN7SKP88-201ENST00000516847 250 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AP003327.1-201ENST00000529684 127 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.13□□□□□ -2.39
SYNE1Q8NF91 7SK.8-201ENST00000612110 250 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 7SK.11-201ENST00000615477 250 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AL512427.1-201ENST00000618593 349 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 7SK.13-201ENST00000622040 250 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 Y_RNA.287-201ENST00000364853 94 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 MIR942-201ENST00000401111 86 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 BTF3L4P1-201ENST00000413813 468 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AC007547.1-201ENST00000462177 490 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AC009646.1-201ENST00000510455 318 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 MTCO3P28-201ENST00000513351 515 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 RNU6-902P-201ENST00000517212 91 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AL157871.3-201ENST00000557231 293 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 MIR5006-201ENST00000583027 110 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AC245014.2-201ENST00000603689 287 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AC246785.4-201ENST00000605374 287 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 RMST_7.1-201ENST00000621935 268 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 Y_RNA.476-201ENST00000384347 108 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 SNORA51.10-201ENST00000384418 136 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 RNU2-72P-201ENST00000411175 163 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 MTATP6P20-201ENST00000414147 562 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 RPL21P111-201ENST00000418453 477 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 RPL37P21-201ENST00000435890 276 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 RNA5SP269-201ENST00000459032 137 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AC097473.1-201ENST00000508142 408 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 RNU6-856P-201ENST00000516959 98 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AC026371.1-201ENST00000551867 419 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.13□□□□□ -2.39
SYNE1Q8NF91 Z83818.1-201ENST00000603584 150 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AL356596.1-201ENST00000624230 379 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 MIR198-201ENST00000637333 62 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
SYNE1Q8NF91 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.13□□□□□ -2.39
SYNE1Q8NF91 RNU6-562P-201ENST00000362731 107 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 RNU6-552P-201ENST00000362869 119 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 RNU6-833P-201ENST00000363486 107 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
SYNE1Q8NF91 SNORA50A-201ENST00000384225 134 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 Y_RNA.465-201ENST00000384293 102 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AL133475.1-201ENST00000404414 305 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 RN7SKP142-201ENST00000411236 328 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AC245047.7-201ENST00000440265 293 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AL031313.1-201ENST00000448435 256 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AC132479.1-201ENST00000449160 144 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 MTND1P3-201ENST00000484956 952 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AC079395.1-201ENST00000510981 262 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AC116347.2-201ENST00000514912 523 ntBASIC0.13□□□□□ -2.39
SYNE1Q8NF91 AC087897.1-201ENST00000550134 156 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms