Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 AC012306.1-201ENST00000423267 114 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 AL645939.1-201ENST00000453429 797 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 AP000705.1-201ENST00000454567 350 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 Y_RNA.638-201ENST00000459374 113 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 RPL21P104-201ENST00000464143 478 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 RNU5F-8P-201ENST00000515941 111 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 RNU6-1278P-201ENST00000516130 107 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 SNORA27.4-201ENST00000516650 95 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 AC011602.1-201ENST00000546484 331 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 AC072026.1-201ENST00000605023 201 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 AC004832.5-201ENST00000608677 401 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 AC010999.1-201ENST00000611856 324 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 AL357075.2-201ENST00000614906 189 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LINC00116Q8NCU8 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 SNORA46.1-201ENST00000391069 153 ntBASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 RNU6-1140P-201ENST00000410517 106 ntBASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 BPY2DP-201ENST00000422208 265 ntBASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 MTCO1P5-201ENST00000433573 344 ntBASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 YWHAEP4-201ENST00000505390 198 ntBASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 RNU2-58P-201ENST00000516403 183 ntBASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 RNA5SP54-201ENST00000516951 92 ntBASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 MIR4282-201ENST00000583613 67 ntBASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 AL110115.1-201ENST00000614396 364 ntBASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 AC073308.1-201ENST00000623696 305 ntBASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 AC073476.4-201ENST00000628409 72 ntBASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 AC110491.1-201ENST00000562191 2010 ntBASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LINC00116Q8NCU8 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 UBE2WP1-201ENST00000362030 340 ntBASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 SNORA72.2-201ENST00000365028 127 ntBASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 RNA5SP390-201ENST00000410191 113 ntBASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 AC019205.3-201ENST00000424573 156 ntBASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 FTH1P6-201ENST00000430768 320 ntBASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 RNA5SP310-201ENST00000459084 116 ntBASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 AC006445.2-201ENST00000510061 472 ntBASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 Y_RNA.662-201ENST00000516028 97 ntBASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 ACA59.2-201ENST00000517061 156 ntBASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 AC006199.1-201ENST00000548728 219 ntBASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 AC011921.3-201ENST00000605540 361 ntBASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 RBBP8P1-201ENST00000449447 1844 ntBASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LINC00116Q8NCU8 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 ZNF204P-201ENST00000416749 2397 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 Y_RNA.82-201ENST00000363000 102 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 Y_RNA.92-201ENST00000363043 102 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 RNU6-1285P-201ENST00000363480 105 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 RNU5F-3P-201ENST00000363767 117 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 Y_RNA.235-201ENST00000364412 102 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 Y_RNA.306-201ENST00000365015 102 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 Y_RNA.312-201ENST00000365089 102 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 Y_RNA.322-201ENST00000365151 102 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 RN7SKP51-201ENST00000410781 304 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 RPL19P1-201ENST00000411635 428 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 BMS1P22-201ENST00000414726 313 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 AC112220.1-201ENST00000434628 355 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 AC007395.1-201ENST00000451333 677 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 RPS3P1-201ENST00000456781 192 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 HMGN1P18-201ENST00000457642 277 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 Y_RNA.650-201ENST00000459002 102 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 Y_RNA.777-201ENST00000516982 102 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 AC107016.2-201ENST00000547968 190 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 Y_RNA.771-201ENST00000598668 102 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 Y_RNA.789-201ENST00000622480 102 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 AC021753.1-201ENST00000635724 168 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 MIR3199-2-201ENST00000636243 86 ntBASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.66□□□□□ -1.82
LINC00116Q8NCU8 CUL1P1-201ENST00000509510 2425 ntBASIC3.65□□□□□ -1.82
LINC00116Q8NCU8 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LINC00116Q8NCU8 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LINC00116Q8NCU8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
LINC00116Q8NCU8 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.65□□□□□ -1.82
LINC00116Q8NCU8 MTND5P35-201ENST00000557537 1720 ntBASIC3.65□□□□□ -1.82
LINC00116Q8NCU8 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
LINC00116Q8NCU8 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms